Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00423 ATGCCGGCAGGTCACGGTCTCCGTTCTCGAACCAGAGATCTGTTCTCTCGGCCCTTCAGGAAGAAGGGTTACATCCCACTCTCCACCTACCTGAAGACCTACAAGATCGGTGACTATGTCGACGTCAAGGTGAACGGTGCCATCCACAAGGGCATGCCCCACAAGTTCTACCATGGCCGCACCGGTAAGGTCTGGAACGTTACAAAGCGTGCCATCGGCGTCGAAGTTAACAAGCAGGTGGGGAACAGGATTATTAGGAAGAGGATCCATGTTAGGGTGGAGCATGTTCAGCCATCAAGGTGCAGGGAAGAGTTCAAACTGAGGAAGATCCAGAATGACAAGTTGAAGGCAGAGGCTAAATCACGTGGGGAGAAGATCAGCACAAAGAGGCAGCCTGAGGGTCCTAAGCCTGGTTTCATGGTAGAGGGTGCAACCCTTGAGACCGTCACGCCCATTCCCTACGACGTGGTTAACGACCTCAAAGGCGGTTACTGA 495 0.5333 MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLKTYKIGDYVDVKVNGAIHKGMPHKFYHGRTGKVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCREEFKLRKIQNDKLKAEAKSRGEKISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00423 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Eupl01g00423 164 MobiDBLite consensus disorder prediction 116 131 - -
Eupl01g00423 164 Gene3D - 99 156 - -
Eupl01g00423 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Eupl01g00423 164 MobiDBLite consensus disorder prediction 116 138 - -
Eupl01g00423 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Eupl01g00423 164 FunFam 60S ribosomal protein L21 99 158 - -
Eupl01g00423 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Eupl01g00423 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Eupl01g00423 164 FunFam 60S ribosomal protein L21 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00423 Eupl-Chr1 17427559 17433623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00423 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 88.415 3.54e-110 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00423 K02889 - vvi:100262509 327.02