Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00410 ATGGCGAACTACGATCTGACTCAACGAATCGCTCCTAACCTGGATCGCCACCTCGTATTTCCTCTTCTTGAATTCCTGCAAGAGAGGCAATTTTACCACGATGACGAGATCCTGAAAGCGAAAATCGAGCTTCTCAGCAAGACCAACATGGTTGATTACGCAATGGACATTCACAAGAGCCTCTACCACACCGAAGAAGTTCCCCAAGATATGATTGATAGGCGAGTGGAGGTTGTTGCGAGATTGAAATCTCTGGAAGAATCGGCAGCGCCATTGGTTTCGTTTCTCCAAAACCCTAATCTGGTTCAGGAACTCCGAGCTGATAAGCAATACAATCTCCAGATGCTGCACGATCGTTTCCAGATCGGTCCAGAGCAGATAGAAGCTTTATATCAGTATGCCAAATTTCAGTTTGAATGTGGAAACTACTCCGGTGCAGCTGACTTTCTGTATCAGTACAGGGCTTTATGCACAAACAGCGACAGGAGTGTGAGTGCATTATGGGGCAAGCTTGCAGCTGAGATACTGATGCAGAACTGGGATACTGCTCTTGAGGAGCTTAATCGGTTGAGAGAAATAATTGAATCAAAGAATTTCCCGTCACCTCTAAATCAGTTGCAAAGTAGAATATGGCTAATGCATTGGAGCCTCTTCATATTTTTCAACCATGACAGTGGCAGAAATGGGATCGTTGATCTGTTTCTCTATGATAGGTATCTAAATGCCATTCAAACAAATGCACCCCATCTTTTACGTTATTTGGCAACTGCTTTGATTGTTAACAAAAAGAGAAGACCTCAACTCAAAGAACTGATCAAAGTCATCCAGCAAGAGCAGTGTTCTTACAAAGATCCCATCACAGAGTTCTTACAATGTTTGTATGTGAACTATGATTTTGATGGAGCGCAACAAAAGCTGCGAGAGTGCGAGGATGTAATATTGAATGACCCCTTCCTTGGCAAACGAGTCGAAGAAGGCAACTTTACTACAGTACCTTTAAGGGACGAGTTTCTTGAAAATGCCCGTCTCTTCATCTTTGAGACCTATTGCCGAATTCATCAGTGCATTGATATAGGAATGCTTGCTGAGAAGTTGAATATGAATTATGAGGAGGCTGAGAGATGGATTGTGAACCTTGTTCGGAATGCAAAGCTTGACGCTAAGATCGATTCCAAGTCAGGGACTATTGTCATGGAACCCAATCTTCTTAATGTGTACGAACAGATCATAGAAAACACCAAGGCACTCTCTATGCGTACTTACAAATATGCAAATCTCATTCTAGAATCTGCACAACCACAACAGGCTGCTCAATAA 1317 0.4275 MANYDLTQRIAPNLDRHLVFPLLEFLQERQFYHDDEILKAKIELLSKTNMVDYAMDIHKSLYHTEEVPQDMIDRRVEVVARLKSLEESAAPLVSFLQNPNLVQELRADKQYNLQMLHDRFQIGPEQIEALYQYAKFQFECGNYSGAADFLYQYRALCTNSDRSVSALWGKLAAEILMQNWDTALEELNRLREIIESKNFPSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIVDLFLYDRYLNAIQTNAPHLLRYLATALIVNKKRRPQLKELIKVIQQEQCSYKDPITEFLQCLYVNYDFDGAQQKLRECEDVILNDPFLGKRVEEGNFTTVPLRDEFLENARLFIFETYCRIHQCIDIGMLAEKLNMNYEEAERWIVNLVRNAKLDAKIDSKSGTIVMEPNLLNVYEQIIENTKALSMRTYKYANLILESAQPQQAAQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00410 438 PIRSF Transl_init_eIF3e 1 438 IPR016650 GO:0003743|GO:0005737|GO:0005852
Eupl01g00410 438 SMART eIF3_N_2 5 137 IPR019010 -
Eupl01g00410 438 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 416 IPR000717 -
Eupl01g00410 438 Pfam PCI domain 285 399 IPR000717 -
Eupl01g00410 438 Gene3D - 236 426 - -
Eupl01g00410 438 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
Eupl01g00410 438 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Eupl01g00410 438 SUPERFAMILY TPR-like 121 196 IPR011990 GO:0005515
Eupl01g00410 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 436 IPR016650 GO:0003743|GO:0005737|GO:0005852
Eupl01g00410 438 SUPERFAMILY "Winged helix" DNA-binding domain 332 400 IPR036390 -
Eupl01g00410 438 FunFam Eukaryotic translation initiation factor 3 subunit E 228 433 - -
Eupl01g00410 438 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Eupl01g00410 438 CDD eIF3E 3 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Eupl01g00410 438 Coils Coil 177 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00410 3 434 Eukaryotic Initiation Factors Gene Family AT3G57290 78.472 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00410 K03250 - nnu:104613455 781.941