Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00389 ATGAAGGCCTGTTTTGTTCTCTGCATCTTTCTCTCTCTTTCATCCTTTGTCGTTCTGAGAAGCCATGGAAGACAAGAAGATGCTCTTACTACTCTTTTCGACAAGAAATTGCACCGAAAAGGAGGGATCGACACAAGCCTTTTTGAGACGAAGAACATTCGAATCATCGATGAAGCTCGAGTTCTTCCTCAAAAAGGATTGAAAGAGAAAGATAGGATCGGAAAATTGCCGGGACAACCCAATGTTAACTTCGACCAATATGGTGGTTACGTAACGGTCGATAAAAAGGCCGGTCGTGCGCTTTTCTATTACTTTACGGAAGCCGAACATTCTAAGGATTCAGCACCTCTCCTCCTTTGGCTTAATGGAGGTCCTGGTTGTTCATCTCTTGCTTATGGGGCAATGGAGGAACTCGGACCATTCCGAGTGCATAGCGATGGCAAAACGCTTTTCCATAACCGATACGCATGGAATAAAGTGGCCAATGTTTTGTTCTTGGAATCTCCGGCGGGAGTCGGCTTTTCGTACTCGAACCGAACGTCGGATTACGATTTGAGTGGTGATCAGAAGACTGCAGAGGATAATTATGTGTTCTTGGTGAATTGGTTAGAGAGATTTCCTGAATTCAAGAAAAGGGATTTCTATATATCCGGTGAGAGCTACGCTGGGCATTATGTACCTCAGCTTGCACATACAATTCTCCAACATAACAAGAAAGGAAATAAGATCAATATCAATCTCAAAGGGATCATTATTGGAAATGCTGTGCTGAATGATGAAAGTGATGAACATGGGATGTATGATTACTTTTGGACCCATGCTCTGGTTTCAGATGAAGCTATCTATCATATTAACAAGGACTGCGATTTCTCCCCAAATGCCACCTCTCAGACCAAGATGTGCTCGCAGGCCCTCATTGAAACTAACAACGATCTTATTCCCATTGATATTTACAACATCTACGCCCCGTTGTGCTTCTCTTCCAATCTCACTGCGAAGCCCAAGAAAGCATCGATCATGAATTTCGATCCGTGCAGCGATATTTATGTGTCTGCATATCTGAACAGACCAGATGTCCAAAAGGCCCTTCATGCCAATGTTACCAAGCTCAGCTATCCCTGGGATTCCTGCAGCGGTTTGCTCTCCTGGGGGGACAGCCCGTCCACCATCTTACCACTCTTACAGGAGTTCATGGCTAACGGACTTCGAGTCTGGGTCTTTAGTGGTGACACAGATGCTAGGGTTCCAGTTACTTCAACTAGATATTCTCTGAATAAGCTTAAACTTCCCTTGAAGACTTCATGGTATCCTTGGTTCGTCAAAGGAGAGGTTGGTGGGTACACGATGGTGTATAAAGGGAACCTAACATTTGCGACGGTGAGGGGAGCAGGCCATGAGGTCCCAAGCTACCAGCCCGTGCGAGCACTTTCACTTATCACGCACTTTCTTGATGGGACGCCCCTCCCCCGTGCTTAG 1476 0.456 MKACFVLCIFLSLSSFVVLRSHGRQEDALTTLFDKKLHRKGGIDTSLFETKNIRIIDEARVLPQKGLKEKDRIGKLPGQPNVNFDQYGGYVTVDKKAGRALFYYFTEAEHSKDSAPLLLWLNGGPGCSSLAYGAMEELGPFRVHSDGKTLFHNRYAWNKVANVLFLESPAGVGFSYSNRTSDYDLSGDQKTAEDNYVFLVNWLERFPEFKKRDFYISGESYAGHYVPQLAHTILQHNKKGNKININLKGIIIGNAVLNDESDEHGMYDYFWTHALVSDEAIYHINKDCDFSPNATSQTKMCSQALIETNNDLIPIDIYNIYAPLCFSSNLTAKPKKASIMNFDPCSDIYVSAYLNRPDVQKALHANVTKLSYPWDSCSGLLSWGDSPSTILPLLQEFMANGLRVWVFSGDTDARVPVTSTRYSLNKLKLPLKTSWYPWFVKGEVGGYTMVYKGNLTFATVRGAGHEVPSYQPVRALSLITHFLDGTPLPRA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00389 491 FunFam Carboxypeptidase 390 485 - -
Eupl01g00389 491 Pfam Serine carboxypeptidase 77 485 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 Gene3D - 390 485 - -
Eupl01g00389 491 SUPERFAMILY alpha/beta-Hydrolases 75 489 IPR029058 -
Eupl01g00389 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Eupl01g00389 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 472 IPR001563 GO:0004185|GO:0006508
Eupl01g00389 491 Gene3D - 345 381 - -
Eupl01g00389 491 FunFam Carboxypeptidase 67 327 - -
Eupl01g00389 491 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Eupl01g00389 491 Gene3D alpha/beta hydrolase 67 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00389 Eupl-Chr1 16642191 16647632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00389 353 488 Calmodulin-binding Proteins AT2G22960 28.676 2.72e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00389 K16297 - ming:122086113 699.893