Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00372 ATGTATGGTGGCTCTCAGGCATCTTCAAAAGACATGAATCTTTTGTTTTCTTCTTCAACTTTCAAGAATTCTGAAGGAGAGTTACAGAAGAGCAGAGAAGCAGGTATGGATGTCAATCTTGTTCAACAGCATCGTCAGCAGCATCATCAGGTGAACTCTGGACTAATGCGCTATCGCTCTGCTCCAAGCTCTTTGCTTGCGAATTTCGTTGATGGAGGCAGTGAGGGTGAAGGATGCGACGATTTTCTACCTCCTCGATCTTCAAGTCCCGAAGCGGAGAGCATATTTGCGAGGTTCATGACTTGTGGTGGCGGTGAATCGGGTTCTCCTGATCTCCGTGAGATCGGAGAGAAATCTCTGCCGACAACTGCAGCTGCTAGTAATAGAAGCCCTCAGTTTTTGGGGGCAATGGAACAAGAACCGGAGGTCGTTCCGCAGCAGAACGGGTATTCTCCTTCTTCTCAGATGATTTACCAAACTCCGCCGCCACCGCCACCACCGTTGCCAAATCACAGCTCCGCTACTACTGCAGGCCCCAGGGAGAGCTCTTACAGAGTGGTGAATTCGATGGCGATGGATCACTCTCCGCAGGTGAAGATGGGTAGCGTTAATTCTTCGAATCTTATCAGGCATAGTAGTTCTCCAGCCGGGCTTTTCTCCCATTTAACGGTTGAAAACGGCTATGCTGTAATGAGGGGTATGGGCAATTTCAGACCCGGGAATGGTACTAATGGAGAATCAGCTGCGTCTACTAGCAGGTTGAAGGGTCAGATAAACTTCTCATCTGGAGCACCTTCCTCATCTGGGCTAATGTCTCAAATCTCTGAAATTGAGAGCGAAAGCATGGGAGCAAGTAGCCCTGATGACGGAAGCTTGGGAAACGGTAATAGTAGCAATCGATACATCCCCGGTTTTCCCATTGGTTCTTGGGAAGATTCCACACTCGACAATTTCACAGGCCTTAAAAGAGCAAGAGATATCAACAGCAAGATGGCTTCTGGCTTGAACACATCACAGACTCAGAATGGAGAGGCTGGAAACCACACTCCTGTTTTGACCCACCATTTTAGTTTGCCAAAGACTTCAGCAGAGATGGCCGCCATGGAGAAGTATCTGCAATTCCAGGACTCTGTTCCTTGTAAAGTCAGAGCTAAGCGGGGTTGTGCCACTCACCCGCGAAGCATTGCAGAGAGGGTGAGAAGAACCCGGATCAGCGAACGAATGAGAAAATTACAAGAGCTTGTCCCAAACATGGACAAGCAAACGAACACAGCAGACATGTTAGACTTGGCTGTTGAGTACATTAAAGACCTCCAAAAACAGGTCAAGGTATTAAACAAGCAACATTACTCAAAACCCTCGAAGATCCTTGCAACAACTCCACTGTACCCTCACTATTTTCTTTTATTTTGCAGGTGCTTAATGATAGTCGAGCAAACTGTACATGTTCAAGCAAACAAAAGGCATAAACCCTACAGTGTGATTTGCTTCTGTACAGAAAATAAATGGGAAGGATATAGATCAAAGCTGACTTATCTTGTAAGCATGGAAGGAGAAGTAAGAGAAATTTTTTATGTAGGAAAGTGGGGGAGAAAAGCTGATAGAATCCCAACTGTAAGATCCAGTAGGCTAACAGAGCTACCTGTTGACGCCATAAAAGAAAAGATAAAACTGTATAGCACATGTTCAAATCATACCTTCTTTCTTGTATGCAATCTACTCGTTTAG 1728 0.4572 MYGGSQASSKDMNLLFSSSTFKNSEGELQKSREAGMDVNLVQQHRQQHHQVNSGLMRYRSAPSSLLANFVDGGSEGEGCDDFLPPRSSSPEAESIFARFMTCGGGESGSPDLREIGEKSLPTTAAASNRSPQFLGAMEQEPEVVPQQNGYSPSSQMIYQTPPPPPPPLPNHSSATTAGPRESSYRVVNSMAMDHSPQVKMGSVNSSNLIRHSSSPAGLFSHLTVENGYAVMRGMGNFRPGNGTNGESAASTSRLKGQINFSSGAPSSSGLMSQISEIESESMGASSPDDGSLGNGNSSNRYIPGFPIGSWEDSTLDNFTGLKRARDINSKMASGLNTSQTQNGEAGNHTPVLTHHFSLPKTSAEMAAMEKYLQFQDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQVKVLNKQHYSKPSKILATTPLYPHYFLLFCRCLMIVEQTVHVQANKRHKPYSVICFCTENKWEGYRSKLTYLVSMEGEVREIFYVGKWGRKADRIPTVRSSRLTELPVDAIKEKIKLYSTCSNHTFFLVCNLLV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00372 575 MobiDBLite consensus disorder prediction 239 298 - -
Eupl01g00372 575 Gene3D - 389 457 IPR036638 GO:0046983
Eupl01g00372 575 MobiDBLite consensus disorder prediction 141 181 - -
Eupl01g00372 575 Pfam Helix-loop-helix DNA-binding domain 393 439 IPR011598 GO:0046983
Eupl01g00372 575 MobiDBLite consensus disorder prediction 240 298 - -
Eupl01g00372 575 SMART finulus 394 444 IPR011598 GO:0046983
Eupl01g00372 575 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 451 - -
Eupl01g00372 575 FunFam Transcription factor bHLH130 family 389 455 - -
Eupl01g00372 575 CDD bHLH_AtbHLH_like 393 445 IPR045239 -
Eupl01g00372 575 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 391 452 IPR036638 GO:0046983
Eupl01g00372 575 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 388 438 IPR011598 GO:0046983
Eupl01g00372 575 MobiDBLite consensus disorder prediction 157 172 - -
Eupl01g00372 575 Coils Coil 428 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00372 Eupl-Chr1 15948112 15951755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00372 36 444 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 41.667 2.42e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl01g00372 HLH 5.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00372 - - ming:122075215 543.502