Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00371 ATGGAGAAAAAGGTGGATTCTGGCCTCTTTGTTAATGATGGTTCATTTATGGAAAGGTTTAAGCAGCTTCAGCAAGGGAAGGGTGCTGCATTAGAGGATTTAAAATCAGGTATAAATTCATCTGGGACTGTGAGGCCGAATGCCACCATTAATAAGACAGCATTGGACTCCAAAGCAAATGACACACGCAAGGCCACACCGTCTTCTTCAAGTGGCAAACTCGCTTTCAGCTTGAAGCAGAAGTCCAAGCTTGTGGCAGCCCCTGTTAAGTTAGGTGCAGATGAGGATGAAGATGAAGGTGATGCTGGACTGGCAAAAAGGCAGAAATTGGGTCAACCAGATGTGTCTGATCTATCATCAGAACAAGAGGATGTTGCACCACCTTCCCCAAGTGATCCCGCAGTGAAGAAAGTTGCAGACAAATTAGCAAGTTTTGTGGCAAAAAATGGAAGGCAGTTTGAGCACATTACACGTCAAAGAAATCCTGGAGATACCCCTTTTAAGTTTTTGTTTGATATAGACTGTGCCGATTACAAATACTATGAGCATCGGCTTATTGAAGAGGAAAAGGCTCTTGCGCAGACTAGAGATTCCCAAACATTGAGCAGTGCCAGTACACTTACTCCAGCTTCTAGAACTTCAAGTGGTTCTCAAAGGAATCCTCTTCAGCAGCCTTCCAATTATCAAATTCCAGCCTCAGCTTTATATGAGGCTAATGAGGACGCCAGATCTCTCGTCACTTCAACTCAAGCAGCAATGGAAAAAAACCCCTCTTATGGTGAATCCAGTTTGCCTCGAGCTGCGGATCCTATAGCAATGATGGAATTCTACATGAAGAAGGCAGCACAGGAAGAGCGGAGGAGGCAACCGAAACAGTCGAAAGACGAGATGCCTCCACCTGCTTCTCTTCAAGGTCCAGGTCCAGCTAAAAAGGGCCATCACATGGGTGATTACATACCGCCTGAGGAGCTCGAGAAATTCTTGGCTAGCTGTAATGATGCAGCTGCACAGAAAGCTGCCAAAGAGGCTGTAGAAAGGTCTAAAATTCAAGCTGACAATGTTGGGCATAGGCTTTTGTCCAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGGAGCTCCAAGAGTGGTCGTGCCGATCCAATTATGGCAGGAAATGTGAAAACGAACAACTTGGGGGTTGGAGCGGAACTGCCTGGTGAGGTCACTCCTGACGATGACATCTATGAGCAGTACAAGAAGAGGATGATGCTTGGATATCGTCACCGACCTAACCCTATGAACAATCCACGGAAGGCATATTACTGA 1305 0.4613 MEKKVDSGLFVNDGSFMERFKQLQQGKGAALEDLKSGINSSGTVRPNATINKTALDSKANDTRKATPSSSSGKLAFSLKQKSKLVAAPVKLGADEDEDEGDAGLAKRQKLGQPDVSDLSSEQEDVAPPSPSDPAVKKVADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDIDCADYKYYEHRLIEEEKALAQTRDSQTLSSASTLTPASRTSSGSQRNPLQQPSNYQIPASALYEANEDARSLVTSTQAAMEKNPSYGESSLPRAADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQGPGPAKKGHHMGDYIPPEELEKFLASCNDAAAQKAAKEAVERSKIQADNVGHRLLSKMGWKEGEGLGSSKSGRADPIMAGNVKTNNLGVGAELPGEVTPDDDIYEQYKKRMMLGYRHRPNPMNNPRKAYY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00371 434 MobiDBLite consensus disorder prediction 193 226 - -
Eupl01g00371 434 ProSiteProfiles G-patch domain profile. 351 398 IPR000467 GO:0003676
Eupl01g00371 434 SMART G-patch_5 349 396 IPR000467 GO:0003676
Eupl01g00371 434 MobiDBLite consensus disorder prediction 246 265 - -
Eupl01g00371 434 Pfam Surp module 137 185 IPR000061 GO:0003723|GO:0006396
Eupl01g00371 434 MobiDBLite consensus disorder prediction 34 75 - -
Eupl01g00371 434 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 434 IPR040169 -
Eupl01g00371 434 MobiDBLite consensus disorder prediction 36 75 - -
Eupl01g00371 434 Gene3D Surp module 119 193 IPR035967 GO:0003723|GO:0006396
Eupl01g00371 434 Pfam G-patch domain 352 396 IPR000467 GO:0003676
Eupl01g00371 434 MobiDBLite consensus disorder prediction 89 138 - -
Eupl01g00371 434 MobiDBLite consensus disorder prediction 282 315 - -
Eupl01g00371 434 ProSiteProfiles SURP motif repeat profile. 138 181 IPR000061 GO:0003723|GO:0006396
Eupl01g00371 434 SMART surpneu2 136 190 IPR000061 GO:0003723|GO:0006396
Eupl01g00371 434 MobiDBLite consensus disorder prediction 195 226 - -
Eupl01g00371 434 SUPERFAMILY Surp module (SWAP domain) 125 189 IPR035967 GO:0003723|GO:0006396
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00371 348 394 C2H2 Transcription Factor Family AT5G26610 51.064 1.65e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00371 K13096 - msin:131220721 629.017