Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00357 ATGGCCGCGGATAACGCCGGCACCCTCCCAACACCAATCTTAGACGCTGAAAGATCAAATCTCCTTCAGAAAATCTATGAGGAGGGAGGATACGTTTACGTTAGCATGGCCACGCTCGCCGCCGGGGGAGACTTCCGGGCGGCGGAGGCTGCGCGGGAGATGGCCTGGGAGCAGCTCCACTCGGGGCCGTGGCACTCGGTGTTGCCTGTCTGGAGGGACGCCTACTCCATGGCGTGTCTCCACGTCGCGGCGTTCCACCATAACGCCGGTGATTTCCGAGAGGCGCTTAGGATTCTCGACATGGGATTGATAATGGGAGGGAGCCTTCTTCGTCAGGATTTGGATTCTGCGGTGGAGATGATTTTGATGAGGCCCGGTTTTGCTGCTAAGGTTTTCGAAGAAGGAGACGGCGTTGAGAAGGAGAGATTTGAATGCTTTTCAGAGGGTTCAAACGAGGCGGAGGCGCTTCGGGTACTGCCTAATAGGTCACTGTCTTGTAAGATAGTAGAGAAGAGGTCTTCTCTATCTTTGGAGGGATTCCTATGTGATTATTTCCTGTCAGGGTCTCCAGTTATAATCAGCGACTGCATGGCTCATTGGCCTGCTAGGAAAAAGTGGAAAGACATGGACTATCTAAAAAAGGTTGCAGGCGATCGGACGGTTCCAGTTGAGGTTGGGAAGAACTATCTGTGCTCTGAGTGGAAGCAAGAGCTGATCACATTCTCTCGGTTTCTTGAGAGGATTCAGTCCAATAACTGTTGCTCAGATGGTCCAACGTATCTTGCTCAGCATCCTTTGTTTGACCAGATACAAGAGCTACGCAGGGACATTTTGGTTCCTGACTACTGTTTTGCTGGTGGGGGGGAACTCAGGTCTCTTAATGCTTGGTTTGGTCCAGCTGGAACAGTGACACCATTGCACCATGATCCACACCATAATATTCTTGCTCAGGTTGTTGGCAGAAAGTATGTAAGGCTTTATCCTGCTTCGGCATCAGAAGATCTTTACCCTTACAACGAATCCATGTTAATCAATTCCAGTCAGGTGGACCTTGACAATCCTGATGAGAAAGAGTTTCCAAAGGCACAAGACCTGGATTTTATGGACTGCATCTTAGAGGAAGGCGAAATGCTTTATATCCCACCAAAATGGTGGCATTATGTTCGATCTCTTACAAGAAGTTTCTCTGTCAGCTTTTGGTGGAGTGTGGGCAGTAGCTCACCCATCTCCTGA 1233 0.4988 MAADNAGTLPTPILDAERSNLLQKIYEEGGYVYVSMATLAAGGDFRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAAFHHNAGDFREALRILDMGLIMGGSLLRQDLDSAVEMILMRPGFAAKVFEEGDGVEKERFECFSEGSNEAEALRVLPNRSLSCKIVEKRSSLSLEGFLCDYFLSGSPVIISDCMAHWPARKKWKDMDYLKKVAGDRTVPVEVGKNYLCSEWKQELITFSRFLERIQSNNCCSDGPTYLAQHPLFDQIQELRRDILVPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGRKYVRLYPASASEDLYPYNESMLINSSQVDLDNPDEKEFPKAQDLDFMDCILEEGEMLYIPPKWWHYVRSLTRSFSVSFWWSVGSSSPIS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00357 410 ProSiteProfiles JmjC domain profile. 253 410 IPR003347 -
Eupl01g00357 410 Gene3D Cupin 167 402 - -
Eupl01g00357 410 SMART cupin_9 259 410 IPR003347 -
Eupl01g00357 410 Pfam Cupin-like domain 182 402 IPR041667 -
Eupl01g00357 410 SUPERFAMILY Clavaminate synthase-like 169 402 - -
Eupl01g00357 410 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 73 403 - -
Eupl01g00357 410 FunFam lysine-specific demethylase JMJ30 168 401 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00357 150 403 Acyl Lipid Metabolism Gene Families AT3G45880 25.329 3.24e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl01g00357 Cupin_8 2.7e-51 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00357 K24444 - nnu:104597503 647.891