Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00335 ATGCAACTCGAAGAGGAAGAATTTGATTTAGCACAACTCCTCGAGGAGTCAGTTAATATGTTCTATCACATCGGTATAAAGAAAGTCATAGACGTGATCTTGGATCCTTGTGACGACTCAGTTATCAAATCCTCTCATGTTAAAGGAGATCGTGGAAAACTTAAACAAATCCTAAATAACTTACTTAGCAATGCTGTGAAGTTTACATCAGAAGGGCATGTCTCTGTTCGTGCTTGGGTTGAGAAACCAAGTTTAGAAAGCTCAATACTTGCTTCTAACAATGTTGGTCTATGGAGCTGTTTACCAAGGATCCTTCACAAGAATAGTGAATCCTACAATGACTTGAGTTCCCTTCATACAGTTCAACAAAATCGAAATTCTACGAAGTTTGTATTTGAGGTGGACGACACAGGAAAGGGAATCCCAAAGGAAAAACAAAAATCCGTTTTTGAGAACTTTGTTCAAGTCAAGGAAACAGCTCTTAGACAAGGAGGCACTGGCTTGGGACTTGGTATTGTTCAATCTTTGGTACGTCTAATGGGCGGAGAGATCAGAATTATGGATAAGGATCCTGGTGAAAGAGGGACTTGTTTCAAATTCCACATTTTCCTTTCCACATGTGAGACCACATCTAGTACTGTTTCAGAAGGAGAAAACATCATATTGCTCGGCAATTAG 678 0.3953 MQLEEEEFDLAQLLEESVNMFYHIGIKKVIDVILDPCDDSVIKSSHVKGDRGKLKQILNNLLSNAVKFTSEGHVSVRAWVEKPSLESSILASNNVGLWSCLPRILHKNSESYNDLSSLHTVQQNRNSTKFVFEVDDTGKGIPKEKQKSVFENFVQVKETALRQGGTGLGLGIVQSLVRLMGGEIRIMDKDPGERGTCFKFHIFLSTCETTSSTVSEGENIILLGN* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00335 225 Gene3D - 1 211 IPR036890 -
Eupl01g00335 225 PRINTS Bacterial sensor protein C-terminal signature 130 144 IPR004358 GO:0016310|GO:0016772
Eupl01g00335 225 PRINTS Bacterial sensor protein C-terminal signature 164 182 IPR004358 GO:0016310|GO:0016772
Eupl01g00335 225 PRINTS Bacterial sensor protein C-terminal signature 148 158 IPR004358 GO:0016310|GO:0016772
Eupl01g00335 225 ProSiteProfiles Histidine kinase domain profile. 1 206 IPR005467 -
Eupl01g00335 225 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3 202 IPR036890 -
Eupl01g00335 225 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 49 203 IPR003594 -
Eupl01g00335 225 SMART HKATPase_4 49 206 IPR003594 -
Eupl01g00335 225 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00335 Eupl-Chr1 14348376 14349252 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00335 1 209 Histidine Kinase Gene Family AT2G47430 56.604 1.61e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00335 - - nnu:104590735 297.36