Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00327 ATGAAGGGTTCGACATCTTTCGCTATTTCGTCTGGGGCTTCTGGTTCTTCTGATTCGTCAATCAACGGTTTGAAATTCGGGAAGAAAATCTACTTTGAAGATGCGGGTATTGGAGTTTCGGATAAATCAGGTGGTGGGTCGTCGTCAGTTTTGGTTCCTGAGGGCCCCACTTCCACGCCGGCGAAGAAGGGCAGGGGGGTTGTTCAGGGCGGGCAGCCTCCTAGGTGTCAGGTTGAAGGGTGTGAGGTGGATCTGAGTGGTGCCAAAGCTTATTACTCCAGGCACAAGGTCTGTGGGATGCACTCCAAGTCTCCTATGGTCATTGTCTCTGGTCTGGAGCAGAGGTTTTGCCAGCAGTGTAGCAGATTTCATCAGCTCCCTGAATTTGATCAAGGAAAGCGAAGTTGTCGTAGACGTCTGGCTGGCCACAACGAGCGTCGAAGGAAGCCATCACCAGGATCTTTGTTATCTTCACGCTATGATCGACTGTCTTCATCTCTCCAAGATAGCAGCAGAGTTGGAGGCTTTCTGATGGATTTTACGTACCCAAGACTGCCGGGGAGGGATGTATGGCCGACCATAAGAGCGGGAAATCGGGTACCTGGCAACCAACTCACTGTTACTGGAAAGTTTCTTCCACATCTATTGCAGGGCAGCTCAGAGAATGCTCCAGCTAATATCTTCTCTCATGCTTCTCACCCATATCTGCAAAGTTCTGCTGGTGGGATGGTCTTTTCCAGTAACGAAATTCCTCCGGATGAATGTTTTGCGGGAGTCTCTGACTCCGGCTGTGCTCTCTCTCTTCTGTCAACTCAACCATGGGGCCCCAGAAACCAAGTGTCGGATCTTTCAGTGAATAATATAACGAATGAGGAAGGGGCCACAATGGCTCTTTCAACAGCACCTCATTGTGCTGTCATGAATAATTTCACGAGAAATATGTGGAGTTTCAAGGGAAATGAAGCTAGTAGCAGCTCACACGAAATGCCACGTGCTTTGGGCCTGGGACAAGATTCACAGCCCGTCAACAGTCAGTTCTCTGGCCAGCTCGAGTTAGCTCATCAGCAGGGGAGACAATACATGGAACTCGGGCATTCCAGGGCTTATGACTCCTCCCCTCATCAGATGCATTGGTCTCTTTAG 1143 0.4996 MKGSTSFAISSGASGSSDSSINGLKFGKKIYFEDAGIGVSDKSGGGSSSVLVPEGPTSTPAKKGRGVVQGGQPPRCQVEGCEVDLSGAKAYYSRHKVCGMHSKSPMVIVSGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPSPGSLLSSRYDRLSSSLQDSSRVGGFLMDFTYPRLPGRDVWPTIRAGNRVPGNQLTVTGKFLPHLLQGSSENAPANIFSHASHPYLQSSAGGMVFSSNEIPPDECFAGVSDSGCALSLLSTQPWGPRNQVSDLSVNNITNEEGATMALSTAPHCAVMNNFTRNMWSFKGNEASSSSHEMPRALGLGQDSQPVNSQFSGQLELAHQQGRQYMELGHSRAYDSSPHQMHWSL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00327 380 MobiDBLite consensus disorder prediction 139 161 - -
Eupl01g00327 380 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 10 368 IPR044817 GO:0003677
Eupl01g00327 380 SUPERFAMILY SBT domain 74 154 IPR036893 GO:0003677|GO:0005634
Eupl01g00327 380 FunFam Squamosa promoter-binding-like protein 14 67 137 - -
Eupl01g00327 380 Gene3D - 66 137 IPR036893 GO:0003677|GO:0005634
Eupl01g00327 380 ProSiteProfiles Zinc finger SBP-type profile. 73 150 IPR004333 GO:0003677
Eupl01g00327 380 Pfam SBP domain 76 149 IPR004333 GO:0003677
Eupl01g00327 380 MobiDBLite consensus disorder prediction 42 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00327 Eupl-Chr1 13982176 13997544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00327 24 380 SBP-box Gene Family AT2G42200 43.158 3.94e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl01g00327 SBP 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00327 - - nnu:104597533 533.487