Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00325 ATGACCCATTTACAGAAACTCAAAACACTATCCTTCCTCAAACGGGTTTTTTCAAATTTTCCAGAAAATCACCTTAGATCATCGATAACCCCAATTTCTATCTGCACTGCATCACTCCACACTGGCAAAACCACAACTTTTTATAGTAGTAGAGCAGTAAACACCAAAAAAACTCCGATTCTGGAGGAAAGAACGACACCTGATTGTCAAACTGTAGCCCGAATCACTCGTAGTGATCGTACCGAGGCCCAAGCCGCTCTCTTGGAGTACCTTCACTGCACCCGAAGTTTGCAGTTCACTGATGCAGAACACATGAGCAAGAACTCTCCGAATTTTCTTGATATGCTTCTGAAGAAGGTCGAGAACGAGCAAGAGATTGGGCGGTCACTAACCAGATTCTTTCGCTACCACCCCATTAATGAATTCGAACCCTTCTTCGAGAGCTTGGGTTTGAAACCTTCCGAATTCAATTCGCTACTTCCTCGTGATTTGATGTTTCTGAGTGATAATGGTTTGTTGTTGGAGAATTATTTTGTTCTATGTAATTACGGCATTCCTCGTGGTCAGATAGGAAAGATTTATAAGGAAGCAACAGATATCTTCGGGTACGTCCATGGAGTTTTGCAGTCGAAGCTTCAGGCTTATGAAGAACTGGGCCTGACTCGAGCTTGTGTTGTTAAGGTTGTGGCGTCGAGTCCTTATCTTTTGGTTGGGGGTGTTAATGGGGACTTTGTTAAGGTCTTAGATGAGCTGAAGAATTTGGGGATTGAATATGATTGGATTGAAGGGCTTTTGTCTGAGACGAATTCTTATGATTGGAGCCAAATGCTTGAGCTTCTCAACTTCTTTAGCGAGATGGGTTGCAGTAAGGAAGAGTTAGGGGGATTAATCAGAAGGCATCCAGAACTGTTATTAGACGATTCAGGGAAAAAAGTGTTTTCTCTGTTTGGGTTGCTATTGAAATTTGGATCGAAGTTCAACGAGATGTCCTCATTGTTTCTGCAGTTTCCTCAAGTCCAAGTTGGGACCTTCATGAAGAATCTGAGGCAGGGCTTTCTATTTCTAATTGAGATTGAAATGGAGGCTGAAGACATTGGGAGGATTGTGCGTGCGCACCCACTAATACTGGGTTCCTGTTCTCTGAAGAAACCCAACAGTGTGCTTGCTAGATTGAATATCGGGAAGAAGCGACTTTGTCAAATTATACAGGAGGATCCAAATCAGTTAAAGAATTGGATTTTGGGATTGAGGATAGAGGCATTGCCCAAATCAGGGGAGGACCAGAGATCACTGATGCAGAAGACTGAGTTCTTGTTGAACTTGGGTTTCATTGAGAACTCAGATGAGATGAAAAAAGCGCTCAAGGTGTTCCGAGGAAAAGGAGGAGAACTTCAGGAGAGATTCGACTGTTTTGTGAACGCCGGTTTGGGTCAGAAAGATGTTTCTGAGATGATCAAAGTGGCCCCTCAAGTTCTGAACCAGTCGAGGATAGTGATTGAGGAGAAAATTGATTTTCTTGTAAATGGGTTGGGTTATCCCATATCGTCTTTAGTGGCATTCCCGGCATATATTTCGTATACGATTCAGAGGGTCAAGCTTAGGTATTCAATGTACAACTGGCTCAAGGATGAAGGAATAGCAGCTCCCAAGTTGGCCTTGAGCACTATCCTTGCATGCTCGGATAAGTTATTTATAAAGCACTATGTAAAACATCACCCTAGAGGCCCTGAAGTTTGGGAGAAGTTGAAGAAAGCATCATCTTCAAGCTAA 1770 0.4294 MTHLQKLKTLSFLKRVFSNFPENHLRSSITPISICTASLHTGKTTTFYSSRAVNTKKTPILEERTTPDCQTVARITRSDRTEAQAALLEYLHCTRSLQFTDAEHMSKNSPNFLDMLLKKVENEQEIGRSLTRFFRYHPINEFEPFFESLGLKPSEFNSLLPRDLMFLSDNGLLLENYFVLCNYGIPRGQIGKIYKEATDIFGYVHGVLQSKLQAYEELGLTRACVVKVVASSPYLLVGGVNGDFVKVLDELKNLGIEYDWIEGLLSETNSYDWSQMLELLNFFSEMGCSKEELGGLIRRHPELLLDDSGKKVFSLFGLLLKFGSKFNEMSSLFLQFPQVQVGTFMKNLRQGFLFLIEIEMEAEDIGRIVRAHPLILGSCSLKKPNSVLARLNIGKKRLCQIIQEDPNQLKNWILGLRIEALPKSGEDQRSLMQKTEFLLNLGFIENSDEMKKALKVFRGKGGELQERFDCFVNAGLGQKDVSEMIKVAPQVLNQSRIVIEEKIDFLVNGLGYPISSLVAFPAYISYTIQRVKLRYSMYNWLKDEGIAAPKLALSTILACSDKLFIKHYVKHHPRGPEVWEKLKKASSSS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00325 589 PANTHER CGI-12 PROTEIN-RELATED 83 256 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 SMART mt_12 514 547 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 SMART mt_12 191 221 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 SMART mt_12 482 513 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 FunFam mTERF family protein 119 270 - -
Eupl01g00325 589 Gene3D Transcription termination factor 3, mitochondrial 113 312 IPR038538 -
Eupl01g00325 589 Gene3D Transcription termination factor 3, mitochondrial 313 585 IPR038538 -
Eupl01g00325 589 FunFam Transcription termination factor MTEF18, mitochondrial 315 582 - -
Eupl01g00325 589 Pfam mTERF 428 564 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 Pfam mTERF 280 445 IPR003690 GO:0003690|GO:0006355
Eupl01g00325 589 Pfam mTERF 174 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00325 Eupl-Chr1 13829477 13831612 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl01g00325 mTERF 5.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00325 - - nnu:104603507 773.852