Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00323 ATGATAGTTCGCGGAATCCTCAAAAATATTCCTCGGGGAATCGAAATGTTCTTGCAAATCAACCGCCCATTGGTTTCGGAAAAATCCTTGAATTTGCCCAAGAACCCACCTTTCAATTTGCAGAAAAAACAATGTTTTTACACTAGTAAACTTGCCCACATTGCAAAAGTTTCAGTTTCTGCGTCAAATCCTTCGTCTACTTCTCCCATAGCTGCCCGAATTTCGCGGGTTGCACGAATTGAGGCTCAAGATGTGCTCTTTGATTACCTGCACTGTACTAGAAACATGCATTTTACCGATGCCGAGCACATTAGCAAGAACTCACCCACCTTTCTTCAGAATCTTCTTTCCAAGGTTGACAACGAGCAAGAGGTCACCCGGTCGCTATCGAAGTTCCTACGCTACCACCCCATTAATGAGTTTGAACCCTTCTTTGAGAGCTTGGGTTTGACACCATCTGAGCTACCCTCCCTTCTTCCGCGTAACCTGATGTTTCTCAGTGATGATGATGTTTTGCTCGAGAACTTCCATGTTCTTTGCAATTATGGGATTCCTCATAGTAAGATCGGCAGGATGTACAGGGAAGAGAGGGAGATGTTCAGATATGATTATGGGGTCTTGGCGTCAAAACTTCGGGCTTATGAAGAACTGGGTATGACTAGAGGCACTGTTATTAAGTTGGTAACATGTTGCCCGCCAGTTTTGATTGGTGGTGTTAATAGAGATTTTGTTCAGGTTCTTGAGAAGTTGAAGGGTTTAGGAATTGAATATGATTGGATTAGAGAATATTTGTCAGATAAAAGCACATATAATTGGAATAGAATGCTTCACATGATGGGTTTTCTTGATGAAATGGGTTGCAGGAAGAAGGATATGGAGAGGTTATTTAAGGTACAGCCTGGGTTCTTGTTTGTAGATTCTGGGAAGAAGATTTATGTATTGGTTTCACTGTTACTCAAATTAGGTCTCAAGATTAAGGATATTTTGTTTTTATTCCTACAATATCCCAGAATCCTAGCTGGGAACTTTGCAAAAAATCTTTGGCGAGCCGTGCATTTCCTGTCCGAGATTGGGATGGAAACTGAAGACATTGCAAAGATCATCTGTACCCAGACACAAATTCTGGGTTCTTGTTCTCTGAAGAAGCCCAGAACCATTTTGTCGAATTTACATATGGGGCCAGATCAGTTGTGCAAGATCATAAAGGAGGACCCACATAAGTTGATCAGTTTGGCCTCACAATCAAAGATCAGGAATGTTAAGAAGGTAGCTTGCGAGGAGGGAGGACATCTTCTGGAGAAAACCGTGTTCTTGTCGAGAATAGGTTACATTGAGAACTCAAATGAGATGACAAACGCTCTGAAACAGTTCCGTGGTAGAGGGGATCAGCTACAGGAGAGGTTTGATTGCCTGGTAAATTCAGGGTTGGACTGCCACGTTGTTTGTAAGATGATCAAAATGGCCCCTCCAGTATTGAACCAGTCCAAGGATGTGATAGAGATGAAGATTGATTATCTCGTGAATCATTTGGGTTACCCTTTGCAATCAGTAGTAGCTTTTCCGACATATTTGTGTTACGATATAAAGAGAATCGAGCTTAGATTTTCAATGTATGTGTGGCTCAGGGAGAAAGGTGCAGCAAAACCCATGTTGGCCTTGAGTACGATTCTTTCTTGTTCAGATGCGCGATTTGTAAAATATTTTGTAAATGTCCACCCAGAAGGTTCAGCCGTATGGGAAAGTTTAAAGAAATCGTCCTCGTAA 1764 0.4189 MIVRGILKNIPRGIEMFLQINRPLVSEKSLNLPKNPPFNLQKKQCFYTSKLAHIAKVSVSASNPSSTSPIAARISRVARIEAQDVLFDYLHCTRNMHFTDAEHISKNSPTFLQNLLSKVDNEQEVTRSLSKFLRYHPINEFEPFFESLGLTPSELPSLLPRNLMFLSDDDVLLENFHVLCNYGIPHSKIGRMYREEREMFRYDYGVLASKLRAYEELGMTRGTVIKLVTCCPPVLIGGVNRDFVQVLEKLKGLGIEYDWIREYLSDKSTYNWNRMLHMMGFLDEMGCRKKDMERLFKVQPGFLFVDSGKKIYVLVSLLLKLGLKIKDILFLFLQYPRILAGNFAKNLWRAVHFLSEIGMETEDIAKIICTQTQILGSCSLKKPRTILSNLHMGPDQLCKIIKEDPHKLISLASQSKIRNVKKVACEEGGHLLEKTVFLSRIGYIENSNEMTNALKQFRGRGDQLQERFDCLVNSGLDCHVVCKMIKMAPPVLNQSKDVIEMKIDYLVNHLGYPLQSVVAFPTYLCYDIKRIELRFSMYVWLREKGAAKPMLALSTILSCSDARFVKYFVNVHPEGSAVWESLKKSSS* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00323 587 Gene3D Transcription termination factor 3, mitochondrial 313 582 IPR038538 -
Eupl01g00323 587 PANTHER CGI-12 PROTEIN-RELATED 87 255 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 SMART mt_12 482 513 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 SMART mt_12 514 547 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 SMART mt_12 190 220 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 Gene3D Transcription termination factor 3, mitochondrial 107 311 IPR038538 -
Eupl01g00323 587 FunFam mTERF family protein 118 269 - -
Eupl01g00323 587 Pfam mTERF 143 236 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 Pfam mTERF 463 564 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 Pfam mTERF 280 418 IPR003690 GO:0003690|GO:0006355
Eupl01g00323 587 FunFam Transcription termination factor MTEF18, mitochondrial 314 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00323 Eupl-Chr1 13768461 13786286 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl01g00323 mTERF 4.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00323 - - msin:131222421 777.704