Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00321 ATGGGAATTTGTTTCCACTCTCAATCACCAGCCTTAGAGGAAGGCTTGCCACTGCCAAACCTTGGGCCCTTTAATTCATCGAGCACTGTTTCAAGTCATTTCGGATCAGCAGCTTCTGCATTGTATGCAAGCAAACGTTACATGGGTTTTCCACAGTATGAGTATCAACTCGGGATCCTCCCTTTATTCTCTCAATTGCCCAAGAATTCTGACCCGGAGATCTCATCATATCAACCTGCTGAGGATCACTTGCTTGTTTATTCGCCAAAGCAAGATGATCTCGACCTTCAAGCACGAGATACCCTGCAATCCGTTGTGGAACTTCCCTTATGTAACAATCGAAATCCTAGATCTTCTGAAAACTCCTGTAAAATTCCATATAAAAGTCTGCAGGGTAGTGAGCTCTTTCCACTTCTGCAAAATAAGTTGGTGGGAGATGATCCCACCTTAAATAGGAGGAACCCGCTAATTCATTTTGAGGGTGTTCAGAATCCTAGAGTGAGTCTTTTTTTCAATCCTCAATCTATAGTTTTTGCATGCAGTCTGGGTATGTGGTTTCTATTGTGCCTTTTCAGGATGGACTGGTTTCTTTTCTTACAGGTTGGTTGTAATCCATATAGCTCTCCATTTGCACAATCAAGCTTCCATCTTCAGCCACAGAAACAATCTCCTAAGCCTTCTTCTGGGGGTGTATCTGTTACTTCTGGAGTGACAGTCACAAGTAAAACACGGATTCGATGGACTCAAGATCTTCACGAGCGGTTTGTTGAATGTGTGGATCGTCTTGGTGGTGCTGAGAAGGCAACTCCAAAGGGAATCCTGAAGCTGATGGACACCGATGGATTGACCATCTTCCATGTGAAGAGCCATTTGCAGAAATATCGCATTGCCAAGTACATACCAGATTCTAAAGAAGGAAAAACCGAGAGAACTTTTATGAATGATGTAACGCAACTCGATCCAAAAACTAGCATGCAAATCAAGGAGGCACTGCGACTACAAGTAGACGTCCAGAAGCATCTTCACGAACAGTTAGAGATTCAGCGAAATCTACAGATGCGGATCGAAGAACAAGGGAGACAACTGAAGAAGATGTTCGACCAGCAACAGGAAACAAACAAGAGCCTGTTTGAGACAGAAAACCTGGATTTCATGTTCCCAGATGATCACTAA 1173 0.4339 MGICFHSQSPALEEGLPLPNLGPFNSSSTVSSHFGSAASALYASKRYMGFPQYEYQLGILPLFSQLPKNSDPEISSYQPAEDHLLVYSPKQDDLDLQARDTLQSVVELPLCNNRNPRSSENSCKIPYKSLQGSELFPLLQNKLVGDDPTLNRRNPLIHFEGVQNPRVSLFFNPQSIVFACSLGMWFLLCLFRMDWFLFLQVGCNPYSSPFAQSSFHLQPQKQSPKPSSGGVSVTSGVTVTSKTRIRWTQDLHERFVECVDRLGGAEKATPKGILKLMDTDGLTIFHVKSHLQKYRIAKYIPDSKEGKTERTFMNDVTQLDPKTSMQIKEALRLQVDVQKHLHEQLEIQRNLQMRIEEQGRQLKKMFDQQQETNKSLFETENLDFMFPDDH* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00321 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 242 297 IPR006447 GO:0003677
Eupl01g00321 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 299 IPR017930 -
Eupl01g00321 390 Pfam Myb-like DNA-binding domain 246 295 IPR001005 -
Eupl01g00321 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 235 375 IPR044848 GO:0003700
Eupl01g00321 390 Pfam MYB-CC type transfactor, LHEQLE motif 325 372 IPR025756 -
Eupl01g00321 390 Gene3D - 241 300 - -
Eupl01g00321 390 SUPERFAMILY Homeodomain-like 240 296 IPR009057 -
Eupl01g00321 390 FunFam Myb family transcription factor 241 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00321 Eupl-Chr1 13743739 13747370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00321 231 369 G2-like Transcription Factor Family AT4G28610 60.417 4.37e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl01g00321 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00321 - - nnu:104597539 388.652