Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00318 ATGAGGGAGATGTCTAACACCAACTGGCCACTGTTTGATTTCGAATATTATCGATCAGTAGACGAAGGCTGGTGTAGAAAAGCTTGCTTGAGTGATTGTTTCTGTGCAATCACCATTTTTAGAAATGGCAACTGTTTGAAGAAGGGGCTCCCACTCTCAAATGGGAGGATGGACCCTAGCTATGGAGGAAAAGCTCTGATCAAAGTACGGAAAGACAATTCTTCGCAATATCCAGGTATAGGTTCAAAGAAGAAATATCCTTCGACTTTGATCCTCATTGTATCCCTGCTTTTAGGCAGCTCTGTGTTTCTGAATATCATCTCACTGTTAGCAATTTCTCTATTCACTTACCGGTCATACTATAAGAGATCACAGAAACTTCAGCCAAATCCAGTCATATCAAGTATGAATCTCCAGACTTTTACTTACAAAGAGCTAGAAGAAGCTACAGATGGGTTCAAAGAACAACTGGGCAGAGGTGCTTTTGGGACAGTTTACAAAGGGATTCTAACACTAGAAAACAGAAATTTTGTTGCAGTTAAGAAGTTAGACAAGATGGAAAGTGAAGGTGAGAAGGAATTCAAAACCGACGTGAGTGCAATTGGCCGGACCAATCACAAGAATCTGGTCCAACTATTAGGATTCTGCAACGAGGGGCCACACCGCCTTCTAGTGTACGAGTTCATGAGTAATGGCTCTTTAGCAAGCTTCATCTTTGGAAGTTCAAGGCCCAGCTGGAACCAAAGAATGCAGATTGCATTTGGAATTGCACGAGGGCTCATGTACTTACATGAAGAGTGCAGCACCCAAATCATCCTCTGTGACGTCAAGTCTGAGAACATACTTCTAGACGACACTCTTACAGCAAGGATTTCTGACTTTGGATTAGCAAAGCTTTTGAAACCTAACCAGACTAAAACATTAACAGGCATCAGGGGGACCAAAGGATATGTTGCCCCTGAATGGTTTAACAACATGGCTATCACAGTGAAGGTGGATGTTTACAGCTTTGGTGTCGTGTTGCTGGAGATCATTTGTTGTCGGAAGAATGTCGAATCAGAGCTGCAGGATTTAAACATGGTGATACTAACTGATTGGGCTTATGATTGCTACATAAATGGAAGATTGGATATGTTAGTGGAGAACGACAAGGAGGCAACAAATGACATGAAGGGGTTAGAGAAGTTGGTGATGATTGCCATTTGGTGTATTCAGGAGGAACCATCCTTAAGACCTACCATGAAAAAAGTCACACAGATGCTGGAAGGAGCCGTTGAAATTTCTGCACCACCAAACACTTCCTCTTTCATTAGTTCAATTGGTTGA 1326 0.4216 MREMSNTNWPLFDFEYYRSVDEGWCRKACLSDCFCAITIFRNGNCLKKGLPLSNGRMDPSYGGKALIKVRKDNSSQYPGIGSKKKYPSTLILIVSLLLGSSVFLNIISLLAISLFTYRSYYKRSQKLQPNPVISSMNLQTFTYKELEEATDGFKEQLGRGAFGTVYKGILTLENRNFVAVKKLDKMESEGEKEFKTDVSAIGRTNHKNLVQLLGFCNEGPHRLLVYEFMSNGSLASFIFGSSRPSWNQRMQIAFGIARGLMYLHEECSTQIILCDVKSENILLDDTLTARISDFGLAKLLKPNQTKTLTGIRGTKGYVAPEWFNNMAITVKVDVYSFGVVLLEIICCRKNVESELQDLNMVILTDWAYDCYINGRLDMLVENDKEATNDMKGLEKLVMIAIWCIQEEPSLRPTMKKVTQMLEGAVEISAPPNTSSFISSIG* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00318 441 Gene3D Transferase(Phosphotransferase) domain 1 229 432 - -
Eupl01g00318 441 ProSitePatterns Protein kinases ATP-binding region signature. 157 182 IPR017441 GO:0005524
Eupl01g00318 441 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 229 429 - -
Eupl01g00318 441 ProSiteProfiles Protein kinase domain profile. 151 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00318 441 SMART serkin_6 151 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00318 441 Gene3D Phosphorylase Kinase; domain 1 115 228 - -
Eupl01g00318 441 CDD STKc_IRAK 157 423 - -
Eupl01g00318 441 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 432 - -
Eupl01g00318 441 FunFam S-receptor-like serine/threonine-protein kinase 120 228 - -
Eupl01g00318 441 Pfam Protein kinase domain 154 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00318 441 SUPERFAMILY Protein kinase-like (PK-like) 132 422 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00318 Eupl-Chr1 13617504 13618829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00318 121 423 Receptor kinase-like Gene Family AT1G60800 40.823 6.06e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl01g00318 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00318 - - vvi:109122813 612.068