Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00314 ATGGCTTCTGCTCTTCCTCGTCATCTGTGCTTGTTGCTTCTCTTTCTTCTACCGGTTTCTACCATCGCTCAAACTTACCGAAACGTAAGCTTGGGCACATCTCTCACTGCCCTCAACGACAACTCTTCTTGGCCTTCACCTTCGGGTGATTTTGCATTTGGGTTCCAGCCCATTGGTACTAAGGGTTTCTTGCTTTCCATCTGGTTCAACAAAATACCTGAGAAGACCATAGTTTGGTCTGCCAACGGAAATAACTTGGTGCAGAGAGGATCCAAAGTTGAGCTGACCACTGATGGCCGACTCGTGCTCAACGACCCTCAAGGCCGAGAGATATGGAAGGCCGAATTCAACAGTGCAGCTGCCTATGCATCTATGCTTGACACTGGGAACTTTGTGGTTGCAATCCGAAATTCTATTGCCATATGGGAGAGCTTTGGTGTACCCACTGACACCATATTGCCTACACAGATATTGGATCAAGGCAGCAAGCTTGTTTCTCGTCAGATGGAGACCAATTACTCAAGCGGAAGGTTCCAGCTTCGGCTACAAACTGATGGCAATCTCGTGCTTTACCCAACGGCTTTCCCAACAGATTCTGTTTATTCCGCTTATTGGGCAAGCATGACTCTGAACACTGACTCTAAGCTGGTCTTCAATCAGTCTGGTTATATATCCCTTAGACAAACAAATGGAAGCCTATTTGATCTCACATCAGAAAACGCAGTTCCAACAAGCAACTTCTACCAGAGAGCAACTATTGATTATGATGGAGTTTTCAGGCAATATGTCTACCCAAAGACCACCAGCCAAATCAATGGAAGGTGGTCTCGGTCCTGGTCCACAGTTTTGTCTGAACCTACAAACATCTGCTTGAGAATTCTAGGGAGTACTGGAAGTGGTGCTTGTGGGTTTAACAGCTATTGCAGACTGGATGAGAACCAGAGACCTAGTTGTGAATGCCCACCTGGGTATACCTACTTGGATCCTGATAACAAGTGGAACGGATGCAAACAAAACTTTCTTTCACAAAGCTGCGAGGAGGGATCGGAAGAAACATCTCTATTTGACATGAGGGAGATGATTAACACCGATTGGCCTCTGTCTGACTTCGAACATTATTCATCAGTAAACGAAGACTGGTGCAGAGAAGCTTGCTTGAGTGATTGTTTTTGTGCAGTCGCCATTACTAGAGATGGCGACTGTTGGAAGAAGAAGCTCCCACTCTCAAATGGGAAGATCGACCCTAGCGTTGGAGGAAAAGCTCTGATCAAAGTACGGAGAGACAATTCTTCGCAATGTTCAGTTATAGGTCCAATGAAGAAAGATCGTTCAACATTGATCCTCATTGGATCAGTGCTTTTAGGCAGCTCTGTGTTTCTGAATCTCCTCTTACTGCTAGCAATTTCTCTGTTGACTTACTGGTCATACCATAACAGATCACAGAAACTTCAGCCAGATCTATTCATGCCAGGAATGAATCTGCGAACTTATACATACAAAGAGCTAGAAAAAGCTACAGATGGGTTCAAAGAAGAGGTGGGCAGAGGTGCTTTTGGGACAGTTTATAAAGGAGCTCTGGCACTAGAAAACATAAACTGTGTCGCAGTTAAGAAGTTAAACAAGACGGTAAGTGAAGGTGTGAAGGAATTCAAAACCGAAGTGAGTGCAATTGGCCGGACCAATCACAAGAATCTGGTCCAATTATTAGGATTTTGCGACGAGGGACTACACCAGCTTCTAGTGTATGAGTTCATGAGCAATGGCTCTTTAGCAGACTTCATCTTTGGAAGTTCAAGGCCTAAGTGGCACCAAAGAATACAGATTGTATTTGGAATTGCACGAGGGCTAATGTACTTACATGAAGAATGCAGCACACAAATCATCCATTGCGACATCAAGCCTCAGAACATACTTCTAGACGGCTCTCTTACAGCAAGGATTTCCGACTTTGGATTAGCGAAGCTTTTGAAATCTGACCAGTCTCAAACATTAACAGGAATCAGGGGGACCAAAGGGTATGTCGCCCCCGAATGGTTCAACAACATGGCTATCACAGTGAAGGTGGATGTTTACAGCTTTGGTATCATGTTGCTAGAGATCATTTGCTGTCGGAAGAATTTTGAATCAGAGCTGCAAGATGAAAACATGGTGATACTAACAGACTGGGCTTATGATTGCTATATCGATGGAAAATTGGATATGTTAGTGGAGAACGACGAGGAGGCAATGGATAACATGAAGAGGCTAGAGAAGCTGGTGATGATTGCAATTTGGTGTATTCAGGAGGAACCATCACTAAGACCTACCATGAAAAAGGTCACACAGATGCTGGAAGGAACCGTCGAAGTTTCTGCACCCCCAAACCCTTCCTCCTTCATTAGTTCAATTGGTTGA 2394 0.4449 MASALPRHLCLLLLFLLPVSTIAQTYRNVSLGTSLTALNDNSSWPSPSGDFAFGFQPIGTKGFLLSIWFNKIPEKTIVWSANGNNLVQRGSKVELTTDGRLVLNDPQGREIWKAEFNSAAAYASMLDTGNFVVAIRNSIAIWESFGVPTDTILPTQILDQGSKLVSRQMETNYSSGRFQLRLQTDGNLVLYPTAFPTDSVYSAYWASMTLNTDSKLVFNQSGYISLRQTNGSLFDLTSENAVPTSNFYQRATIDYDGVFRQYVYPKTTSQINGRWSRSWSTVLSEPTNICLRILGSTGSGACGFNSYCRLDENQRPSCECPPGYTYLDPDNKWNGCKQNFLSQSCEEGSEETSLFDMREMINTDWPLSDFEHYSSVNEDWCREACLSDCFCAVAITRDGDCWKKKLPLSNGKIDPSVGGKALIKVRRDNSSQCSVIGPMKKDRSTLILIGSVLLGSSVFLNLLLLLAISLLTYWSYHNRSQKLQPDLFMPGMNLRTYTYKELEKATDGFKEEVGRGAFGTVYKGALALENINCVAVKKLNKTVSEGVKEFKTEVSAIGRTNHKNLVQLLGFCDEGLHQLLVYEFMSNGSLADFIFGSSRPKWHQRIQIVFGIARGLMYLHEECSTQIIHCDIKPQNILLDGSLTARISDFGLAKLLKSDQSQTLTGIRGTKGYVAPEWFNNMAITVKVDVYSFGIMLLEIICCRKNFESELQDENMVILTDWAYDCYIDGKLDMLVENDEEAMDNMKRLEKLVMIAIWCIQEEPSLRPTMKKVTQMLEGTVEVSAPPNPSSFISSIG* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00314 797 FunFam Serine/threonine-protein kinase 149 293 - -
Eupl01g00314 797 FunFam S-receptor-like serine/threonine-protein kinase 476 584 - -
Eupl01g00314 797 ProSitePatterns Protein kinases ATP-binding region signature. 513 538 IPR017441 GO:0005524
Eupl01g00314 797 ProSiteProfiles Bulb-type lectin domain profile. 29 146 IPR001480 -
Eupl01g00314 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Eupl01g00314 797 Gene3D - 148 290 - -
Eupl01g00314 797 Pfam D-mannose binding lectin 76 158 IPR001480 -
Eupl01g00314 797 CDD STKc_IRAK 513 779 - -
Eupl01g00314 797 CDD B_lectin 38 145 IPR001480 -
Eupl01g00314 797 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 789 - -
Eupl01g00314 797 SMART blect_4 35 148 IPR001480 -
Eupl01g00314 797 Coils Coil 732 752 - -
Eupl01g00314 797 PIRSF SRK 1 796 IPR024171 GO:0004674
Eupl01g00314 797 Pfam Protein kinase domain 510 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00314 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 146 - -
Eupl01g00314 797 CDD PAN_AP_plant 343 425 - -
Eupl01g00314 797 FunFam Uncharacterized protein 148 272 - -
Eupl01g00314 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 207 IPR036426 -
Eupl01g00314 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 785 - -
Eupl01g00314 797 SUPERFAMILY Protein kinase-like (PK-like) 489 778 IPR011009 -
Eupl01g00314 797 Gene3D - 31 147 IPR036426 -
Eupl01g00314 797 SMART serkin_6 507 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00314 797 Gene3D Transferase(Phosphotransferase) domain 1 585 791 - -
Eupl01g00314 797 Gene3D Phosphorylase Kinase; domain 1 472 584 - -
Eupl01g00314 797 ProSiteProfiles Protein kinase domain profile. 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00314 Eupl-Chr1 13537854 13540710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00314 429 789 Receptor kinase-like Gene Family AT4G18250 36.388 1.81e-69 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl01g00314 Pkinase 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00314 - - nnu:104603514 1040.02