Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00308 ATGCAGATTTTTGTCGTCATTATTTCTACCATGTGGAGATTCAAACCTTTCATGCCGAAAGAACAGGCAGGGCTTGAGGGTCGCACTATTGACATTGGCAATCTAAAAGTTCATATCCGGAATGTGATCGCTGAAGGAGGATTCTCCTGTGTTTACCTTGCCCGTGATGCTGTTCATGCATCTAAGCAGTATGCCTTGAAGCACATCATATGTAATGATGAGGAATTGTTGGATCTGGTGATGAAAGAAATATCTGTGATGAAATTGCTCAGAGGGCACCCCAATGTTGTTACTCTTCACGCCCATACTATTTTGGATATGGGAAGGACGAAGGAAGCACTCCTTGTGATGGAATTTTGTGAGAAGTCACTGGTTAATGTGCTGGAGAGCAGAGGAGCTGGTTATTTTGAGGAGAAACAGATTTTTTCAATCTTCAGGGATGTGTGTAATGCAGTGTTCGCGATGCACTGCCAGTCTCCGCCCATTGCTCACAGAGACTTGAAAGCCGAGAATCTTCTATTGGGGCCTGATGGAATGTGGAAGTTGTGCGATTTTGGGAGCACTTCAACCAATCACAAACGCTTTGAAAGGCCTGAGGAAATGGGCATTGAAGAAGACAATATCAGGAAGCACACTACACCTGCCTATAGATCTCCTGAGATGTGGGATCTGTTTCGAAGAGAACTTTTAAATGAGAAGGTAGACATCTGGGCTCTCGGGTGTCTTCTCTACCGCATCAGCTACTTCAAATCTGCGTTCGATGGCGAATCAAAGCTGCAAATCTTAAATGGGAACTATCGCATTCCAGAGTTACCAAAATACAGTACTGGCATAACAGATCTAATAAGAGACATGCTTCAAGCTTCTCCGGACGACAGACCAGACATCACGCAGGTTTGGTTTCGTGTCAATGAGCAATTACCTGCAGAATTGCAGAAGTCTCTACCTGACAGGCCAGATGACATGCACCCGCCAATTGCTGACATACGCGATGAAGGCATTCAAAACTCTGCAAGAAAGTCTCCTCCAATGCCTCGTAGGAGTCCTCCACCCCCACCTTTGTCTAAAGAACAGTCTCCAAATGTATCATCAGCATCTGTCACTTCCAAGGTAGGTGGAGGTGGAGGTCCATTGGGTGCATTCTGGTCTACCCAACATGCAAACGAATCACTTGTTACAGAGGACAAGGGTGGACCTGTATTTGATGAAGAACCTTCTAGCCAAAACACATCGAAGCATGATCAACGGAATCCAGAGAACCGTCGTCATCCTGAGAACACTAATCCTCCAAAAGAGCAAAATGTCCGAACCCGTCCTATCAGAAGGACTGCACATGGAAACTCCCTCAAGAGGCTTGACGATGGCCCATCTGAGGACTTTGAAATAAGATTTTTCCCAAAGGATGCAGAACGTGGTTCCGAGAAAACAAAAGCATCACAATCAGAGAACGTGGTAACCTTCCAGAACGAGGCGTTCAACACTTTTGTTGCTGAATTTGATACCAGTAAAATTAACTCTGAAGATAATAATAAGAAATCGGTGAAGGAAGAAGCTTTAGAAGCTGAAGTTGATCAGCTGAAGGAGCAGCTGAAACAAGCTAACTTGGAGAAGGCCGAAATAACCTCTAAATATGAAAAACTGTCTGCCATTTGCCGTTCTCAGAGGCAGGAGATCCAAGAGCTAAAGCAAGGCCTTGCTGCTAGAACTCCATCACCAAACAGAGATGCTTCAAAGAACCTAAACTCTTCTGGAAGCCAGTCTGGCACTCCCTCGAGAGAGAAGATTCAAGGAACTGTGTGGGAACTCCAGCAAGGGATGCTTGCGAACAGTTCCCCAAGCCCGGACTCCAAGGCATGGCAGGCATTCTCAGATGAGGCTAAACTGCTGCCTCCTTTGAAGAACAACACCGCCAAATCGGTTCGGACAACAAATGGCCTCCAGAACAAACAAGCTTCTAGCATAAGTTCCACTCCTGACGTCTGGGGTTTTGGCACGGATAGTTTCACGGCAGTCCCTGCTAGCTCTCAGATATCCAGAACCCCTGTTCAAGGGAATAATTCACAGCGCTTTGGTGACTCAAAGAAGGTAGAAAGCAAACAGGCTTCTCAGCCTGCTGGATGGTCTGGTTTCTAA 2133 0.4599 MQIFVVIISTMWRFKPFMPKEQAGLEGRTIDIGNLKVHIRNVIAEGGFSCVYLARDAVHASKQYALKHIICNDEELLDLVMKEISVMKLLRGHPNVVTLHAHTILDMGRTKEALLVMEFCEKSLVNVLESRGAGYFEEKQIFSIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGPDGMWKLCDFGSTSTNHKRFERPEEMGIEEDNIRKHTTPAYRSPEMWDLFRRELLNEKVDIWALGCLLYRISYFKSAFDGESKLQILNGNYRIPELPKYSTGITDLIRDMLQASPDDRPDITQVWFRVNEQLPAELQKSLPDRPDDMHPPIADIRDEGIQNSARKSPPMPRRSPPPPPLSKEQSPNVSSASVTSKVGGGGGPLGAFWSTQHANESLVTEDKGGPVFDEEPSSQNTSKHDQRNPENRRHPENTNPPKEQNVRTRPIRRTAHGNSLKRLDDGPSEDFEIRFFPKDAERGSEKTKASQSENVVTFQNEAFNTFVAEFDTSKINSEDNNKKSVKEEALEAEVDQLKEQLKQANLEKAEITSKYEKLSAICRSQRQEIQELKQGLAARTPSPNRDASKNLNSSGSQSGTPSREKIQGTVWELQQGMLANSSPSPDSKAWQAFSDEAKLLPPLKNNTAKSVRTTNGLQNKQASSISSTPDVWGFGTDSFTAVPASSQISRTPVQGNNSQRFGDSKKVESKQASQPAGWSGF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00308 710 MobiDBLite consensus disorder prediction 672 710 - -
Eupl01g00308 710 Pfam Protein kinase domain 40 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00308 710 MobiDBLite consensus disorder prediction 635 659 - -
Eupl01g00308 710 MobiDBLite consensus disorder prediction 396 439 - -
Eupl01g00308 710 Coils Coil 509 564 - -
Eupl01g00308 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Eupl01g00308 710 MobiDBLite consensus disorder prediction 446 460 - -
Eupl01g00308 710 CDD STKc_GAK_like 36 308 - -
Eupl01g00308 710 PANTHER SERINE/THREONINE PROTEIN KINASE 11 694 - -
Eupl01g00308 710 SUPERFAMILY Protein kinase-like (PK-like) 38 346 IPR011009 -
Eupl01g00308 710 Gene3D Transferase(Phosphotransferase) domain 1 20 316 - -
Eupl01g00308 710 MobiDBLite consensus disorder prediction 561 599 - -
Eupl01g00308 710 MobiDBLite consensus disorder prediction 630 659 - -
Eupl01g00308 710 MobiDBLite consensus disorder prediction 312 460 - -
Eupl01g00308 710 ProSiteProfiles Protein kinase domain profile. 37 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00308 710 MobiDBLite consensus disorder prediction 343 357 - -
Eupl01g00308 710 FunFam probable serine/threonine-protein kinase DDB_G0280111 20 315 - -
Eupl01g00308 710 SMART serkin_6 37 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00308 710 MobiDBLite consensus disorder prediction 314 328 - -
Eupl01g00308 710 MobiDBLite consensus disorder prediction 570 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00308 Eupl-Chr1 13377958 13383917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00308 18 302 CBL-interacting serine-threonine protein kinases AT4G18700 30.392 6.37e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Eupl01g00308 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00308 K08853 - ming:122061866 1054.66