Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00300 ATGGAAATAGTGGCTGAAAAAGATGCAGCCTTACTTTCACAGGAACATGAGGGTACTGAAAATTCCATAAGTAGCAACCAGAATGCAACAGACTGCCACAATCTGAGGTTACACTATCTTGCTTTCAAGGAATCACTAACAGGAGGGGAAGAAATAGCAAAAGAAGATTTTGACGAATTCTCCAAAATAATTAGCAAAGTAGATAGACTGCATAAGGAAGTTCAGAATCCTCGAGAGCAAGTCGCTGATGCAGAGGCCCTTCTCGACATTACAAAGACATTGTTTTCATCGCTCAAATCCTCCCAGAACCCTCAGGATTTATCAAATTTTATTTCTGGTATGCTGGAACAGTATAAAGAAAATGGTGTTTCAGAGGGTTGCAGTGGTTACCAATCTATATCCTGGAGAAAAGTGGGATTCAACGCATCTTATATCTTTAGGAAGGCGCCAGGAATTCCCACCATGTTTGGACCAATGGATACCAAACCAACCTATAGAAAGTCTGTATTTCAAAGGAAACGTCAAACACCTGTGAAGATCTTTTGTCCCAATGAGGTGGAAGACACTGCTTACAAGAACACAACAGACACCGAGAAGAACATTTTAACAATGTTCGAGATTTTGAAGAAGCAAAAATGCATCCAACTGGAGAAGTTAGTGCTGAACAGATTGTCATTTTCTCAGACTGTGGAGAACATCTTTGCCTTCTCATTTCTAGTCAAAGATGGAAGAGCCGAACTTGCAGTCAACGATAGTGGCACCCATCTTGTTGTCCCACGAAATGCTCCCTCAGCAAGGGTGATCGCTAGTGGAGATGTCTTATATCATCACTTTGTCCTCAGGTTTGATTATCAAGATTGGAAGTTAATGTTGGACACGGTTGAGAAGGGAGGGGAGGCAATGCCTGACAGAAATGTAGTATAG 924 0.4156 MEIVAEKDAALLSQEHEGTENSISSNQNATDCHNLRLHYLAFKESLTGGEEIAKEDFDEFSKIISKVDRLHKEVQNPREQVADAEALLDITKTLFSSLKSSQNPQDLSNFISGMLEQYKENGVSEGCSGYQSISWRKVGFNASYIFRKAPGIPTMFGPMDTKPTYRKSVFQRKRQTPVKIFCPNEVEDTAYKNTTDTEKNILTMFEILKKQKCIQLEKLVLNRLSFSQTVENIFAFSFLVKDGRAELAVNDSGTHLVVPRNAPSARVIASGDVLYHHFVLRFDYQDWKLMLDTVEKGGEAMPDRNVV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00300 307 Pfam Nse4 C-terminal 214 295 IPR014854 -
Eupl01g00300 307 PANTHER UNCHARACTERIZED 14 304 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00300 Eupl-Chr1 13029800 13035625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00300 30 304 Non-SMC Element family AT1G51130 45.520 1.98e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00300 K22825 - qsu:112015280 367.081