Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00299 ATGGCGAAACTGGAGGACACAGAGAAGGAAACATGGGGAACATGGGAAGAACTTTTGCTAGGATGTGCCGTTAACCGGTACGGGACAAAGAGTTGGGACTCGGTCGCCATGGAAATACAGAACCGAAGCCCTTCTCCTCATCATTTAACCCCTCAGAACTGTAAACAGAGATATTACGACCTCCAACGCCGATTTGTGGCGAAAGACGATAAAATCAACGACGAAAAAGACGAATCTGAGACGGACCATAAGAAAGAAAAAATGATTCCTTGGCTCGATGAGTTGAGAAAACTCCGAGTCGCTGAGCTTCGACGCGAGGTTCAACAATACGATGTTTCGATCGTGTCTCTGCAATCGAAGGTGAACAGATTGAAAGAAGAACGAGACCGAAGCTTGAGAGAGAAGGAAAATAGCGTGGAAAAAACAGATCTGAAGAAAGAAAGGGTCGAAGGCGAGAAAAAGGAAGGAGACAGAGAACAGGAGAAATCTTCGCCGGAGAACGTCTCCGGGAAACCGGTATCCGGCGAGGAGTCCGACCGTGAGAACCAGTCGTTCAACGAGTCGAATTCGACGGATCCGAAAGGTGAGAATCGGGAGACCGGAGTAGAGGAGGCGGAGAAAAAACCGGAACCGGTCGAAACCGCAGGCAAACCGGATCCGGTTCCCGGAGACTCGCCGGGTGATAAACCAGTTGGTGAGGGGTCATACAACGGGAGCTCGGATACGATAGCCAAAGATTCGGCGGTTCCGGCGGTCGATAAATCGTCGGAAGCGATCCGAGCCAGGGAAGCCGGTGACTCAGCTGAGTTATGGGAATCGGTGGCCGAGTCAAAGGGGGGAGCAGACGAAGGGATGAAAGAGAGCAGTGATGTGCAGAGCTCCGCTAGTTTATCGAGGAAGAATCACAGGAAAAAGGCAACTTCCGGAAGCAGCAGCGGCGAAGAGCCGGAGACGGACGAGATTTCTCCCGCCATAAAACGGATCTCTGTTAAATCACAGCCGTTGGTGGGTTTCCTCGAGATTATCCGCTCGCACAAATACGGCTCCGTATTCGAGCGCCGGCTCGAAAGCCAGGAGACTGCCAAGTACAGGAGCTTAATCCGGCAACATGTAGACCTCGAAACCGTGCAAACAAGGCTCGAAAAAGGGCGATACTCGAACTGCAGCCGCAAATTTTTACGTGATGTGCTTCTTCTATTCAACAACGCAATTGTATTTTTCCCAAAGAACTCTGCTGAATCCATTGCCGCAATTGAACTTCGACAACTAGTTTCGAAAGAAATGGCGTGCAGAATTCGGAAATCAAATCCACCAGAAGAAGAACTGACGCCGCCACAAACTGTACCACCAACTATACTCCCAAAACCCGATCCAGAACCATCCGATTCCTTGCTTGTGAAACCTAAGTCTTCTGGTCCTATGATCGCATGCCGGAAACGTAGCTCAATCTCTGCAAAAGCATCGTCCACAGTGGTTGATAGAAAAGGAGAACAAAAGGCAGCTGTGATTGAAGAGAAACCAGTTCCTGATCGAATGCAACCTGATAATTCGTCTGCAAATGTGGTTGAGGAACAAAGTATCACAAAGAAGAGAACGAGAGAGAGGCCAGTATTGGGTGCGAGAAGCTCGAGAACAAACAGCAAGAATCGGAAGACCACTCATACTAACAAGAATTCAAACCAAACCCCAAGTACCAGCTTGAACCCTAGTTTAGTAGTTAAGGGAGCAACTTCTGAGGATAATTTGGACTCGAAAATGGAGAAGAAGAACAATACTACGACAGTGGCAAAGAAGCGAAGTGCGGCGAATTTCTTGAATAGGATCAAACGGAACTCTTCGTCGTCGAATGGTGCATTGTTGGAGACGTTAAAGAGCTCCATGAGTAATTCTAACAATGGAAAAGGAGGGGGAGTAGTGGAGCAGAAGAAAAGTGGCGGTAGGAGTGAAGGGCGGAAAGATCAGGTTTCCAGGCAAAATTCATCTGGAAAACGGGGGCGGGAGCAGAGTAGTCCGGCAAAGAGGAGTGTTGGACGACCGCCGAAGCGGGCTACAGCACCACCACCTCTACAGCCCCCAACAAATGGTAAGCGGTCTGCAGAAACGGTTGAAACGGAGGTAGTTGGTTCGAGACAGCCAAGGAAACGATCGAGGAGATGA 2157 0.4942 MAKLEDTEKETWGTWEELLLGCAVNRYGTKSWDSVAMEIQNRSPSPHHLTPQNCKQRYYDLQRRFVAKDDKINDEKDESETDHKKEKMIPWLDELRKLRVAELRREVQQYDVSIVSLQSKVNRLKEERDRSLREKENSVEKTDLKKERVEGEKKEGDREQEKSSPENVSGKPVSGEESDRENQSFNESNSTDPKGENRETGVEEAEKKPEPVETAGKPDPVPGDSPGDKPVGEGSYNGSSDTIAKDSAVPAVDKSSEAIRAREAGDSAELWESVAESKGGADEGMKESSDVQSSASLSRKNHRKKATSGSSSGEEPETDEISPAIKRISVKSQPLVGFLEIIRSHKYGSVFERRLESQETAKYRSLIRQHVDLETVQTRLEKGRYSNCSRKFLRDVLLLFNNAIVFFPKNSAESIAAIELRQLVSKEMACRIRKSNPPEEELTPPQTVPPTILPKPDPEPSDSLLVKPKSSGPMIACRKRSSISAKASSTVVDRKGEQKAAVIEEKPVPDRMQPDNSSANVVEEQSITKKRTRERPVLGARSSRTNSKNRKTTHTNKNSNQTPSTSLNPSLVVKGATSEDNLDSKMEKKNNTTTVAKKRSAANFLNRIKRNSSSSNGALLETLKSSMSNSNNGKGGGVVEQKKSGGRSEGRKDQVSRQNSSGKRGREQSSPAKRSVGRPPKRATAPPPLQPPTNGKRSAETVETEVVGSRQPRKRSRR* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00299 718 MobiDBLite consensus disorder prediction 644 660 - -
Eupl01g00299 718 Pfam Myb-like DNA-binding domain 9 61 IPR001005 -
Eupl01g00299 718 Pfam Bromodomain 343 413 IPR001487 GO:0005515
Eupl01g00299 718 SUPERFAMILY Homeodomain-like 8 67 IPR009057 -
Eupl01g00299 718 SMART sant 8 64 IPR001005 -
Eupl01g00299 718 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 6 718 - -
Eupl01g00299 718 Coils Coil 100 152 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 442 457 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 123 325 - -
Eupl01g00299 718 CDD SANT 11 61 IPR001005 -
Eupl01g00299 718 ProSiteProfiles Myb-like domain profile. 4 62 IPR001005 -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 552 577 - -
Eupl01g00299 718 CDD Bromodomain 338 428 - -
Eupl01g00299 718 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 66 IPR017930 -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 497 511 - -
Eupl01g00299 718 Gene3D - 4 61 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 434 718 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 580 594 - -
Eupl01g00299 718 SUPERFAMILY Bromodomain 331 431 IPR036427 GO:0005515
Eupl01g00299 718 ProSiteProfiles Bromodomain profile. 343 414 IPR001487 GO:0005515
Eupl01g00299 718 SMART bromo_6 324 433 IPR001487 GO:0005515
Eupl01g00299 718 MobiDBLite consensus disorder prediction 123 165 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 595 637 - -
Eupl01g00299 718 MobiDBLite consensus disorder prediction 192 214 - -
Eupl01g00299 718 Gene3D - 324 434 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00299 Eupl-Chr1 12925045 12931605 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl01g00299 Bromodomain 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00299 - - nnu:104603529 864.759