Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00297 ATGGCGAGAATTGATAAACGCGATCCGGTCGGTAGGAGCAGAGGAGAGATGGGGGAACCGAGGGTTGTGAAACGCGAACCGGTAAGTAGTAGGGGTAGGGGTGAGACGGGAGAAGCAGAGACAATCGAATCGGGTCAGCAAGGTGTGACGGACAGGAGAGTTCTTCGATCGCGATATCTGGCCGTTAAGAGTCTGATTAGCAATGAGAGAGATGATATCTCTAGAGTGGATTCCAATAAATTCAAGTCGATTATCAGCGAAGTTGAGAGCTTGCATCAGCTAGTTCAGAAGCCTAGGGAGCAAGTTGCAGATGCAGAGGCTCTTTTGGACATTGCCAACACTTTGGTTACCTCTGTTAAATCACAGAGCAATGAGGGAGTAAGCCCTTTAGATTTTGTAACTTCTCTGCTTCAAGACTTTGGGCTGCAAGATGGTGGAACAAGTTCGGACAATGCCCGGAATTCGATGGTTTGGGGTGACATTGGCCTTGCCGTCTCTCACATTTTCAGGAAGGTCCCTGGATGCTGCACCATGCTTGGGCCTATGAATACTGAACTGAAACAGCGGAAGGCTGTGGTTCAGCGGAAACGTGTGAGGCCAACTGAAAGTGCTCATCCTGAAGAGCTTGACGATACTGGTGCAGAAGAGAGAACAGATACAGATAAGAACATGTCAACTATGTTTGAGATCTTAAGGAAGAAGAGGAGTGTCAGGCTCGAGAATCTAGTGTTGAACAGAAACTCCTTTGCGCAAACAGTGGAGAATATATTTGCTCTGTCATTTCTAGTTAAAGATGGGCGGGCTGAAATAGCAGTGGATGACAATGGTTATCAATTTGTTTGTCCAAGGAATGCTCCTGCTGCCAATGCAGTAGTCTCGGGGGATGTTTCTTACAATCATTTTGTCTTCAGATTTGACTTCAAGGATTGGAAGTTGATGATGAAATCTGTAGGGGTTGGAGAGGAGCTCATGCCACATAGGAATCCTGCAAACATATCGATTGATTCTCAGGGAGAGACAGTAACTGAAGACTTTCAGACAACGTTGCCGACAACACCAATAAGAAAATTGTCTAGGAACCGTGGCCTGGTAATACAGGAACAATTGGTTGTGGAAGAGTCAACTGAAAATGATGATGCTAATGCAAAAGCTTCTGCCATCCGAAAGGGTAAGCGGAAGCTTCGATGA 1188 0.4613 MARIDKRDPVGRSRGEMGEPRVVKREPVSSRGRGETGEAETIESGQQGVTDRRVLRSRYLAVKSLISNERDDISRVDSNKFKSIISEVESLHQLVQKPREQVADAEALLDIANTLVTSVKSQSNEGVSPLDFVTSLLQDFGLQDGGTSSDNARNSMVWGDIGLAVSHIFRKVPGCCTMLGPMNTELKQRKAVVQRKRVRPTESAHPEELDDTGAEERTDTDKNMSTMFEILRKKRSVRLENLVLNRNSFAQTVENIFALSFLVKDGRAEIAVDDNGYQFVCPRNAPAANAVVSGDVSYNHFVFRFDFKDWKLMMKSVGVGEELMPHRNPANISIDSQGETVTEDFQTTLPTTPIRKLSRNRGLVIQEQLVVEESTENDDANAKASAIRKGKRKLR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00297 395 PANTHER UNCHARACTERIZED 20 380 IPR027786 GO:0005634|GO:0006281|GO:0030915
Eupl01g00297 395 Pfam Nse4 C-terminal 237 324 IPR014854 -
Eupl01g00297 395 MobiDBLite consensus disorder prediction 190 222 - -
Eupl01g00297 395 MobiDBLite consensus disorder prediction 1 38 - -
Eupl01g00297 395 MobiDBLite consensus disorder prediction 374 395 - -
Eupl01g00297 395 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00297 Eupl-Chr1 12807836 12811333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00297 48 394 Non-SMC Element family AT1G51130 57.143 6.64e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00297 K22825 - nnu:104603531 518.079