Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00275 ATGGCAGAGATTGCTGTGAAACTTGCAATCGATAAGTTGGTTCCCTTGCTCTTCGAAGAAACAAAACTGTTGAATGGAGTTCGTAGAGAAGTCACATACATCAAGGATGAATTGGAGAGCATTCGAGCCTTTTTAAGGGATGCAGATGCAAGGATAGAGGGAGATGAAGCAGTGAAAGTTTGGGTAAAACAGGTAAGAGAAATAGCATATGACATTGAAGACATCTTGGACATATTTGCGCTTCACCTGGCACAACAATCTCGTCGCCATGGATTCTTTGGTCTTCTACATAAACTTGATCAATTGGTCAAGCACTTGAAAGCTGGCCATGTCATAGCCACTGGCATACAAGATATTAAAGCAAGGTTGGATGAGATTAAGCAACGAAGTGAAAGATATCGTTTTGATAGCTCAGAGCAAGGCTCAAGTTCTAACACTGGTGGGAATGATACATGGTATGATCTTCGATTGGATGCCCTTTACACTGAAGAAGCCGAACTCGTGGGCATTGAGATGCATAAAAATCAATTAATAAGATGGTTAGTAGATGGATTTCCAAGGCGAACAGTGTTTGCGGTGGTTGGCATGGGTGGGGTGGGCAAAACCACCCTCGTAAAGAAGATTTACGATAACCAACCAGTGATAAGACACTTTGAATGCCATGCTTGGATCACTGTGTCTCAATCATTCAAAGTGGAGGAGGTCCTAAAGACCCTGATAAAGCAATTCTATGAGTCAAGGAAGGAGTCAGTTCCCGACGGGGTGCATGCAATGGACAAAACTCCTTTGATTAACATATTGAGGGAGTATTTACAACCAAAAAGGTATGTAGCTGTTTTTGATGATGTGTGGGACATGAATTTTTGGAATTATGTAAAAAATGCTTTACTTGATAACAATTGCGGTAGTAGGATCTTGGTCACAACTCGCCACGGTGACGTTGCTTCTTCTTGCGTAGAATATTCGAGTCATATTTACCATCTTCATCCTCTACCTCAGAAAGAGTCTTTGGATCTCTTCCTTAGAAAGGCATTTGGATCAAACTTTGGGGGATATTGTCCACTAGAGTTAAAGGATCTGTCTAATAAAATAGTGAAGAAATGTAAAGGATTGCCACTAGCTATTGTGGCAATAGGCGGTCTTTTGTTAAGAAAAGACAAGACTGTATTGGAATGGAAAAAATTGCATGACAGCCTTGCTTCTGAGTTAGAAGAGAATCCCAAGCTCACAAGTATAATGAAAATCCTCTCACTAAGTTACAATGATATGCCATACTACCTTAAATCTTGTTTCTTGTACTTTGGTATTTTTCCAGAGGATTATGTTATACGGTCTGATCGTCTTACTCGATTATGGATTGCTGAAGGATTCGTGAAAGAAAAGCCAGGAAAAATAATAGAAGAGGTTGCAGAAGACAACCTCAATGAACTCATTCGCAGGAACTTGGTTCATGTAGACGTCCTTAACATTAAGGGAAATGTAATAGGATGTCAAATCCATGATTTAATGCGTGATTTCATTCTTTCAAGGTTTGAGATGGAGAATTTTTGCAAAGTTATATATGAAACGAACATTAGTTTGCATGAGAAAATTCGACGACTAGCCTTGTACAAAAGCGGCGAGAATGTTCCAAAAAGCACGAATTTATCCCTAACACGTTCTCTTATCATGTTTGGGTTCGATAAATTGCCAAAACCCTTGATGCACACTCTTCTTTCTAATGGGCTATTGAAGGTACTAGACTTGCAAGATGCACCTTTGGAAGATTTTCCCTGTGAAGTTACAAATCTATTCCATTTGAGGTATTTAAGTTTAAGTAATACAAGGATCCGGACGCTACCAAATTCTATAGGGAAACTACAAAACTTAATAACATTGAATATTGGGCGGACTTACGTAATTGAGTTGCCAATTGCAATCTTGAAGCTCCAGAAACTACGACATCTTTTAGCTTATCATGTTGACAGTGAAGGTATCAACCCTTTCTCTTTTCACTCGGGGATTAAGGTGCCTGAGGGAATCGGGTGTTTAAAATGCCTACAAATATTGTCAGTTATAGAGGTAAACCAAGGAGCTTGCAGAATAATTACAGACTTGGGAAAATTGACACAGTTGAGGATGTTAACCATTGAGAAACTGAGAAGAGAAAACGGGTCAGATATGTGCGCCTCCATTTCTAAGATGAACCACCTCGAGTCCTTATCTGTATCTTCAATAGAAAAAGATGAGTTTCTTGATTTACAATTCACGTTGTGCCCTCCCCCTTCGCTTCTTCAGCATCTATATTTGTATGGGCCTCTAGCGAAGTTACCTGATTGGATTTCCGACCTTCATAACCTTGCCAAAATAGAGCTAGGGTGGTCGATATTAAGGGACGACCCCATGAAAGTACTTGGAGATTTACCTAATTTACAAGACCTGTGGCTCATCCGTCACGCATATGCTGGAGAGCAGTTACATTTTGAGGCAGGAAATTTTCAGAGACTTAAGAAATTAACACTATTCAATTTAGAGAGGTTGAATTGGATGATAGTGAAGGAAGGTGCATTGCCTGTCGTGAAGAGTTAA 2568 0.3976 MAEIAVKLAIDKLVPLLFEETKLLNGVRREVTYIKDELESIRAFLRDADARIEGDEAVKVWVKQVREIAYDIEDILDIFALHLAQQSRRHGFFGLLHKLDQLVKHLKAGHVIATGIQDIKARLDEIKQRSERYRFDSSEQGSSSNTGGNDTWYDLRLDALYTEEAELVGIEMHKNQLIRWLVDGFPRRTVFAVVGMGGVGKTTLVKKIYDNQPVIRHFECHAWITVSQSFKVEEVLKTLIKQFYESRKESVPDGVHAMDKTPLINILREYLQPKRYVAVFDDVWDMNFWNYVKNALLDNNCGSRILVTTRHGDVASSCVEYSSHIYHLHPLPQKESLDLFLRKAFGSNFGGYCPLELKDLSNKIVKKCKGLPLAIVAIGGLLLRKDKTVLEWKKLHDSLASELEENPKLTSIMKILSLSYNDMPYYLKSCFLYFGIFPEDYVIRSDRLTRLWIAEGFVKEKPGKIIEEVAEDNLNELIRRNLVHVDVLNIKGNVIGCQIHDLMRDFILSRFEMENFCKVIYETNISLHEKIRRLALYKSGENVPKSTNLSLTRSLIMFGFDKLPKPLMHTLLSNGLLKVLDLQDAPLEDFPCEVTNLFHLRYLSLSNTRIRTLPNSIGKLQNLITLNIGRTYVIELPIAILKLQKLRHLLAYHVDSEGINPFSFHSGIKVPEGIGCLKCLQILSVIEVNQGACRIITDLGKLTQLRMLTIEKLRRENGSDMCASISKMNHLESLSVSSIEKDEFLDLQFTLCPPPSLLQHLYLYGPLAKLPDWISDLHNLAKIELGWSILRDDPMKVLGDLPNLQDLWLIRHAYAGEQLHFEAGNFQRLKKLTLFNLERLNWMIVKEGALPVVKS* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00275 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 434 IPR027417 -
Eupl01g00275 855 Coils Coil 116 136 - -
Eupl01g00275 855 Pfam NB-ARC domain 171 422 IPR002182 GO:0043531
Eupl01g00275 855 Gene3D - 4 113 - -
Eupl01g00275 855 PANTHER DISEASE RESISTANCE PROTEIN RP 33 834 IPR044974 GO:0006952
Eupl01g00275 855 SUPERFAMILY L domain-like 499 837 - -
Eupl01g00275 855 CDD RX-CC_like 2 127 IPR038005 -
Eupl01g00275 855 Pfam Rx N-terminal domain 5 89 IPR041118 -
Eupl01g00275 855 PRINTS Disease resistance protein signature 270 284 - -
Eupl01g00275 855 PRINTS Disease resistance protein signature 368 382 - -
Eupl01g00275 855 PRINTS Disease resistance protein signature 190 205 - -
Eupl01g00275 855 PRINTS Disease resistance protein signature 824 840 - -
Eupl01g00275 855 FunFam Probable disease resistance protein At1g63360 420 509 - -
Eupl01g00275 855 Gene3D Ribonuclease Inhibitor 532 847 IPR032675 -
Eupl01g00275 855 Gene3D - 331 419 IPR042197 -
Eupl01g00275 855 Gene3D - 155 325 IPR027417 -
Eupl01g00275 855 Gene3D - 420 510 IPR036388 -
Eupl01g00275 855 FunFam Probable disease resistance protein At1g61300 157 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00275 Eupl-Chr1 10682067 10684634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00275 192 387 WRKY Transcription Factor Family AT5G45050 25.888 1.52e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00275 K13457 - msin:131255308 832.017