Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00271 ATGGACTTGACGGAGAGAGAGACTCATGACTTCATGAACGTAGACTCTTTCTCTCAGTTGCCGTTTAAACGTCCTGCTCCCATTAGAGAGAAAGGCATTCGCCTCTTTGGTATCGAATTCGGTGGAGAGGCTGCTGTGAGTGACGAGTCCGAGTCCGATGCAACTAAAGTGTTTGAGGATGCGAAGGATAACGATAACGGTGAGAGCGGTCGCAAATTCGAGTGCCATTACTGCTGCCGAAACTTCCCGACCTCTCAAGCTTTAGGGGGTCACCAGAACGCGCACAAGCGTGAGCGTCAGCATGCTAAACGTGCACACCTCCAGTCCGCCATGGCACACAATAGCATCCCTGACGGACATGTGTACGGGCTCGTGAATTATCGGCTCGGTTCAGCACCGACGCCAACACTGACCTACCCATCTTGGACCAACAACACCATTTCTAGTCACAACAGGTTTTATGGGAACCAGAGTTCATTTTCTCAGCCACCGATTAATGGAAGCCCTTTAGCCTTGTGGAGAATCCCAGCCGTTCAAAGCAACCAGGGTTATAACCGGGACCGTTTGTTGCTGCCTCTGTACGCAGGCGATGACTCGAAACCACCGTCGATCATCGGCTCTAGTTCTCAGAGCCGACACATGTACGAACAGAAGCCGCACGTACAAGACCATGTGAGTTTGGATCTGCATCTGTAA 696 0.5144 MDLTERETHDFMNVDSFSQLPFKRPAPIREKGIRLFGIEFGGEAAVSDESESDATKVFEDAKDNDNGESGRKFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMAHNSIPDGHVYGLVNYRLGSAPTPTLTYPSWTNNTISSHNRFYGNQSSFSQPPINGSPLALWRIPAVQSNQGYNRDRLLLPLYAGDDSKPPSIIGSSSQSRHMYEQKPHVQDHVSLDLHL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00271 231 MobiDBLite consensus disorder prediction 216 231 - -
Eupl01g00271 231 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Eupl01g00271 231 Gene3D Classic Zinc Finger 48 119 - -
Eupl01g00271 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Eupl01g00271 231 PANTHER ZINC FINGER PROTEIN GIS 1 231 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Eupl01g00271 231 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Eupl01g00271 231 MobiDBLite consensus disorder prediction 201 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00271 Eupl-Chr1 9940265 9941317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00271 5 231 C2H2 Transcription Factor Family AT3G58070 40.909 3.57e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00271 - - nnu:104597603 367.466