Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00269 ATGCCTGAGCTCCGTAGTGGAGTACGTCGAGGCCGTGCTCCGACTCTAGATCAGCGGCGTAAGCCGAGAGGTCGAGCAGTCGGGAAAAAACCCCAGCCGTTGGTCGGTAACTACATCAGAACTAGAGCCGCTGTTGCCAAGGAGGCGGCCAAAGCCCAAGTGGTTTCCGGATTTGAGGTTAAGAAGACTCGCGCAGTAAGGCCCAGGACTAGATTGGCTGCTGGTGCCAGGAATCGTGCGAAGGCTGCCGTGATCGTGATTTCTGATAAAAACTGTGAATCGGGTGGTCCTGATCAGTTTAAGGAGGTTCAAGAAGGAGGAGGAATTCCGCGCATCCCCAGTCGAGGGGAAGAGGGGTGTGCAGAGAGTCGCCAGAAAGAAATGATGGCTGGCGATAGCGGTGGCTTGAGCGCTAATAAGGTCGCTGGGCAGGAAGAAGAAGGCAGCACTGCTCCTTTCCCTGAAAGGGTTCAGGTAGGAGGATCACCGGTTTATAAGATCGAGAGGAAGTTGGGTAAAGGAGGGTTTGGTCAAGTATTTGTTGGTCGTCGTGTTTCAGGTGGGACTGAGCGGACAAGCGGTCCTGGGGCTATCGAGGTGGCTCTTAAATTTGAGCATAGAAGCAGCAAAGGTTGTAACTATGGTCCTCCATATGAGTGGCAAGTTTACAACACTCTTGGTGGCAGTCATGGAGTGCCTAGGGTACACTATAAGGGGAGGCAAGGTGACTACTATGTAATGGTTATGGACATGTTAGGGCCTAGCTTATGGGATGCATGGAATTCTTCAGGTCAAGCGATGTCCTCAGAAATGGTAGCTTGTATTGCGGTTGAGTCTATATCAATCCTAGAGAAGATGCACTCAAGGGGCTATGTTCACGGAGATGTAAAGCCAGAGAACTTTCTTCTTGGTCAGCCATCTACAGCACAAGAGAAGAAGTTGTTTCTCGTTGACCTTGGATTAGCAACGAGATGGAGAGATGGTGCTAGTGGTCAGCATGTTGAATATGATCAACGTCCTGATGTGTTCAGAGGAACTGTACGATATGCTAGTGTTCATGCTCACTTGGGAAGAACTGCAAGTAGAAGAGATGATCTGGAATCTCTTGCATATACACTCATCTTTCTTCATCGGGGCAGGTTACCATGGCAAGGATATCAGGGCGACAACAAATCATTCCTAGTATGCAAGAAAAAGATGGCAACATCTCCTGAAATGCTGTGTTGCTTTTGTCCTCCACCTTTTAAGCAATTTCTTGAGATCGTGGTGAACATGAAATTTGATGAGGAGCCCAGCTATTCCAAGCTGATATCTTTGTTTGAGGGTTTGATTGGACCAAATCCGGCTATAAGACCAATTAATACTGATGGTGCTCAGAAGATAATCTATCAGGTGGGCCAAAAACGGGGTAGGTTGACTATTGAGGAAGAAGACGACGGGCAACCGAAGAAGAAGGTCCGTCTAGGAGTTCCTGCTACCCAGTGGATTTCAGTTTACAATGCCAGGCTACCAATGAAGCAGAGGTACCATTATAATGTGGCCGACGGACGATTGGCGCAACATGTGGAGAGAGGAAATGAAGATGGTCTGCTCATTAGTTGTGTGGCATCTTGTTCAAATCTTTGGGCACTCATTATGGATGCTGGAACTTGTTTCACATCTCAAGTTTATGAATTGTCTCCGTCCTTTCTCCACAAGGAATGGATTATGGAGCAATGGGAGAAGAACTATTACATCAGTTCTATTGCCGGTTCTAACAATGGTAGCTCTCTTGTGGTGATGTCTAAAGGCACCCAATACACGCAACAATCTTACAAAGTAAGTGAGTCTTTCCCCTTCAAGTGGATAAACAAGAAGTGGAGAGAAGGATTTCACGTGACTTCAATGGCAACGGCTGGAAGCCGATGGGGTGTTGTCATGTCTCGCAACGCAGGCTTTAGCGATCAGGTTGTCGAGCTTGATTTTCTCTACCCGAGTGAGGGCATCCACAGGCGTTGGGATAGTGGTTTCCGGATAACATCTACAGCTGCTACTTGGGACCAAGCTGCTCTTATCTTGAGTGTGCCCAAGCGCAAACCTGGGGATGAAACTCAGGAGACCTTGCGTACGTCTGCATTTCCAAGTACTCATGTTAAGGAGAAATGGGCGAAGAATCTCTACCTTGCTTCCGTGTGCTACGGACGCACTGTATCGTGA 2196 0.4809 MPELRSGVRRGRAPTLDQRRKPRGRAVGKKPQPLVGNYIRTRAAVAKEAAKAQVVSGFEVKKTRAVRPRTRLAAGARNRAKAAVIVISDKNCESGGPDQFKEVQEGGGIPRIPSRGEEGCAESRQKEMMAGDSGGLSANKVAGQEEEGSTAPFPERVQVGGSPVYKIERKLGKGGFGQVFVGRRVSGGTERTSGPGAIEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDAWNSSGQAMSSEMVACIAVESISILEKMHSRGYVHGDVKPENFLLGQPSTAQEKKLFLVDLGLATRWRDGASGQHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGYQGDNKSFLVCKKKMATSPEMLCCFCPPPFKQFLEIVVNMKFDEEPSYSKLISLFEGLIGPNPAIRPINTDGAQKIIYQVGQKRGRLTIEEEDDGQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADGRLAQHVERGNEDGLLISCVASCSNLWALIMDAGTCFTSQVYELSPSFLHKEWIMEQWEKNYYISSIAGSNNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDSGFRITSTAATWDQAALILSVPKRKPGDETQETLRTSAFPSTHVKEKWAKNLYLASVCYGRTVS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00269 731 ProSitePatterns Protein kinases ATP-binding region signature. 171 203 IPR017441 GO:0005524
Eupl01g00269 731 MobiDBLite consensus disorder prediction 96 136 - -
Eupl01g00269 731 Pfam Protein kinase domain 165 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00269 731 PANTHER CASEIN KINASE-RELATED 165 694 - -
Eupl01g00269 731 MobiDBLite consensus disorder prediction 1 22 - -
Eupl01g00269 731 MobiDBLite consensus disorder prediction 1 34 - -
Eupl01g00269 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Eupl01g00269 731 SMART serkin_6 165 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00269 731 FunFam casein kinase 1-like protein HD16 138 487 - -
Eupl01g00269 731 ProSiteProfiles Protein kinase domain profile. 165 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00269 731 SUPERFAMILY Protein kinase-like (PK-like) 165 450 IPR011009 -
Eupl01g00269 731 Gene3D Transferase(Phosphotransferase) domain 1 138 478 - -
Eupl01g00269 731 CDD STKc_CK1 165 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00269 Eupl-Chr1 9440816 9468802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00269 152 334 EF-hand Containing Proteins AT4G36070 27.179 1.87e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl01g00269 Pkinase 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00269 - - nnu:104597586 1301.96