Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00249 ATGATGGATAGCCAAAGCAAAGAAGATCCACTTGAAACTGAGCAATCATCTAAGCAATTAGATTTAGAGGGCAAGGATGATGTTGTCCAAGACACTTCTCAAAAGGCATCAGAAACGGGAGGGGATATTCCAATTAGTGTGGAATCTGGTGTTTCAGCAGATGTGGGGGATAGATCAGGGATGCTTGGCATGACTTTCAAATCAGAGAATGAAGCATATGAATATTACAATACATATGCAAGGTCTGTTGGGTTTAGTGTACGGAAACATTGGACTACAACTAGAAAAAAGGATAAGAAAATCATGGCAAGGATTTTTTGTTGTTCTAGCGAAGGTAAACCTGAAAAAAATTCAAAAACTGGAACTCCATCCAAACCGCGACCAGTGACACGATTCGGTTGTCAAGCACGAATGCGTATCAAATTAGAAAAGAATGAAAACTTTGTCGTGACGGAGTTTATAGAAGAACATAATCATGAGCTTGCACATCCAACTACAGTGCATTTGTTAAGGTCACAAAGAAAGATACAGCCTGCACAAGTTGGCTCGATCAACAATATTCGGTCCACAAGCATAGGAGCTACTGAGATTTCTTCTTACATGAGCACGGAAGCTAAAGGATCTCAAAATCTCAACTTCATACAATCAGATTGTGATAATTATGTGCAAAAAATACGTACTGAGTTTCTGAAAAAAGGAGATGCACGGCTTCTTTTAGATTACTTCAAGCAAAAGCAAAAAGATGATAAATCTTTCTTTTATTCAATACAAATGGACGAGGACAATCGAGTTAGCAATTGTTTTTGGTGTGATGCTAAGTCGAGAATAGACTATAGCTTCTTTGGTGATGTCGTGTGTTTTGACACGACATACAGGATGAATGAGTATGACATGCCATATGCACCAATTGTTGGCGTGAACAATCATAGACAAATTGTGCTCTTTGGTAGTGCTTTGTTGAAGGATGAGACGACAGAGACATTCATATGGTTGTTTGAAACATTTTTAGATGCAATGGGAGGGAAGCGAATGAAAACAATTTTTACAGACCAAGCCGTTGCAATTACTAGTGCAATTAGACAAGTGCTACCTGATACACAGCATCGTTTGTGTTTATGGCATATTTATCAAAATGCCTTAAAGCAACTATCTGACATGTTTAAGAGATTTAATTCTTTTGCGTCAGATTTTCAGAGATGCATATATGACAATGAGACAGAGGATGAGTTTCTGTCATGTTGGGAAGAATTACTAAAGAAGTATGAGTTGTTGGAGAATGAATGGTTTCGAGGTTTATATCAGTTGCGTGAGAAATGGGCACAATCATATGGTCAGGAACACTTTTATGCAGGTATGACGACTGCTCAAAGAAGTAAAAGTATGAATAATTATTTCAAGAAGTATTTCAAGAGAAAGCAAATCCTACGAGAGTTTTTGGATCAATATGAAAAAGCAGTGGCTCGTCGGCGTGATAAAGAAGTAAGTGCAGATTTCAAATCGAGGACAACAGCACCAAACTTGGTATCAAAATGGGCAGTAGAAAGTCGAGCAGCAGAGAGGTACACTAGAAAAATGTTCATTGTTTTCCAAGAGGAGGTTAAGGGGGTTATGGATTTGGAAGTGGCATTGGATGGTGATGATGGGACAACGTGCACATATGGGGTATCATCATATAATGGTGCTAGGCCTCGCATAGTTAGTTTGGTCTCTTTGGACCACACAATCAAGTGTAGCTGCAAAAAGTTTGAAACCACGGGGATACTTTGTGCACATGCACTAAAAGTGTTGCGTAAGTTAAATTTGCCAGATCTCCCATCTCAGTACTATTTAAAGAGGTGGACCAAAGATGCAACAGCTAATGTTGTGTCCGATGCAAGTCAAGAAACAATGGAGGTCGATATTAACCCATCCTTGTCGGCACGATATAGTGAGTTGTCTCACTTGGCTGTAATTATAGCTGCAAAGGGATCTAAAACTAAAGAATTAAGTTCAGTGACAAAGTGTGGACTAATGCGGTTGTTAAACAAATTACAGTCTTATTCAGAGTCCCCCTTAGATCAGGCCAGACCTCTTGAAGATATCAACTGTGCAAATCATGACAATATGGGTGAAGAAAGTGTTGCAGACCATTCAGGTGCAAATATAACATTGCTGGAGCCATCACGTAAGAAGGCGAAGGGTCAACCTAGTGGTAGAATCAGGGGCACATTAGATAATAGAAAAAATAGGAATGAAGCACAATCACAACGGAGAAAAGGAGTAGCCGGTAATAGAGACAATATTAGTCATACCATGTCACCTGAAAACCCAGGGCTCCCTCCTCATCTAGCAAGACCTTTGAACATGGTCCATTTCACTCAGGGACCAGTTGGGTTGGTAGACCAGGCATCATATGGGCCAATATCAGGTGAATGGAGTGCATCGTCTTCGTGGCATGGCGAGAGTCGCCCACCAAATGTCGGTGGATACCCAGGTGCTTCAAGCATCCAGGGTCTTCCTTTTCACCAAGTTATACCTTCAAGCATGCCGCTAATGCAATGTGTTTACCCATATGGTTATACTCAGGGATCAATTAGGCCTACTGACCACACTACATTACAACATGTTGCAAATGACACTCGTTCCATTCAGGGATTTTTTAGCCTTTCGTCTCAACAAGCTTCAACACATATTGCACCGCCTATACCACAGTCACCTGCACGTAGGCTAGACTTTTCAGAATCATCAACGTCAGAATGA 2739 0.4049 MMDSQSKEDPLETEQSSKQLDLEGKDDVVQDTSQKASETGGDIPISVESGVSADVGDRSGMLGMTFKSENEAYEYYNTYARSVGFSVRKHWTTTRKKDKKIMARIFCCSSEGKPEKNSKTGTPSKPRPVTRFGCQARMRIKLEKNENFVVTEFIEEHNHELAHPTTVHLLRSQRKIQPAQVGSINNIRSTSIGATEISSYMSTEAKGSQNLNFIQSDCDNYVQKIRTEFLKKGDARLLLDYFKQKQKDDKSFFYSIQMDEDNRVSNCFWCDAKSRIDYSFFGDVVCFDTTYRMNEYDMPYAPIVGVNNHRQIVLFGSALLKDETTETFIWLFETFLDAMGGKRMKTIFTDQAVAITSAIRQVLPDTQHRLCLWHIYQNALKQLSDMFKRFNSFASDFQRCIYDNETEDEFLSCWEELLKKYELLENEWFRGLYQLREKWAQSYGQEHFYAGMTTAQRSKSMNNYFKKYFKRKQILREFLDQYEKAVARRRDKEVSADFKSRTTAPNLVSKWAVESRAAERYTRKMFIVFQEEVKGVMDLEVALDGDDGTTCTYGVSSYNGARPRIVSLVSLDHTIKCSCKKFETTGILCAHALKVLRKLNLPDLPSQYYLKRWTKDATANVVSDASQETMEVDINPSLSARYSELSHLAVIIAAKGSKTKELSSVTKCGLMRLLNKLQSYSESPLDQARPLEDINCANHDNMGEESVADHSGANITLLEPSRKKAKGQPSGRIRGTLDNRKNRNEAQSQRRKGVAGNRDNISHTMSPENPGLPPHLARPLNMVHFTQGPVGLVDQASYGPISGEWSASSSWHGESRPPNVGGYPGASSIQGLPFHQVIPSSMPLMQCVYPYGYTQGSIRPTDHTTLQHVANDTRSIQGFFSLSSQQASTHIAPPIPQSPARRLDFSESSTSE* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00249 912 ProSiteProfiles Zinc finger SWIM-type profile. 567 600 IPR007527 GO:0008270
Eupl01g00249 912 MobiDBLite consensus disorder prediction 1 58 - -
Eupl01g00249 912 SMART 26again6 575 602 IPR006564 GO:0008270
Eupl01g00249 912 MobiDBLite consensus disorder prediction 1 32 - -
Eupl01g00249 912 MobiDBLite consensus disorder prediction 111 130 - -
Eupl01g00249 912 MobiDBLite consensus disorder prediction 718 775 - -
Eupl01g00249 912 Pfam MULE transposase domain 284 378 IPR018289 -
Eupl01g00249 912 Pfam FAR1 DNA-binding domain 74 162 IPR004330 -
Eupl01g00249 912 MobiDBLite consensus disorder prediction 887 912 - -
Eupl01g00249 912 MobiDBLite consensus disorder prediction 749 767 - -
Eupl01g00249 912 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 678 IPR031052 GO:0006355
Eupl01g00249 912 Pfam SWIM zinc finger 574 600 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00249 Eupl-Chr1 8256586 8266203 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl01g00249 MULE 1.8e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00249 - K17604 psom:113336801 787.334