Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00230 ATGAGGATCAGAAAGCGATCTGCGCCGTTGCCTTTCTCTTTCCTCTCTCCTGTTGCTCTACCAGTCTCAGTCCCAGATGCCCCACCATCGAAGCCAGACCTTGAACAACAATACGATGGACGAGCAGCGCTAGCAGCTAATGGAGAGGAACAAGAACCAAGAGGGTTGCACTCAGGTGAAGACGATCTCTCTTTACAAAACAACACCCATCTCCATCCGTTGTACGATTCACCCAATCAACATTTTCGGCGATCCAAAGTGGAAGATCACCGACCCCGGCCCGATCTGCAGTTGACGATCATAAGGGTAAAGAACGGCTGGATTTGTTCCGACGGGGAGAGACAGGAAAATAAAGAGTCTTGCGTGCACCCGAATCATGCCCTAGTGGAGGAGGCCTTGAAAGGACCAGAAGAGAAAGAAGAAGAAGATGAGGGGAATCAGATATGGGGATTGAAAGATAAGAGCAATAATTTAAGGAAGGGAAGCCGATTTGGTGCAGAAACCACTTCTGGGGTGCGGCCATTTCAAGTAGTTGGGAGGTGGTGTGAAGGAGAGAAAGCGTTCCCATTGAAGAAGAGAAGAGGGAGCTTTGAGCGGAAAGTAGGAGAAGAAACAGTATCAGAGAAAGAGAAGAAAATGAAGAGTAAACTGAAAACAAAGACAAACAAGGAATGTGGTCATGAGGAAGAAGAAGAGAGAGGAGATGGGGTTGATAGCACAAGTGTGAAGAAGAAGAGATGGATTAGTGGTGTTGGTGGTTCGATCATGGAGGGTTCGAGGTGCAGTCGTGTTAATGGGAGGGGATGGAGGTGCTGCCAACAAACCCTCGTGGGTTACTCTCTATGTGATCACCACCTAGGTAAGGGAAGACTTAGGAGCATGAGCAGTGTACGAAGCCGTAGTTCGAGCGTTAGTAGAGCTAAGAAGGAAGAAGAAGCTGGGTCATTATCGTCGCTGTCGTCACAGCAACAGAAAGGCTTGGAAGATGAAGAGGTTTGCGAAGAGGAAGAAGAAGAGAAGCCACTGATGATAATCAGAAACAAGAGAAAGAAGATAGGTATGGTAAAGGCTCGATCAATAAGCAGTTTGCTCGGCCAACCACCTGCTCATAAGAGCAACAACATGATAGTATAG 1134 0.4753 MRIRKRSAPLPFSFLSPVALPVSVPDAPPSKPDLEQQYDGRAALAANGEEQEPRGLHSGEDDLSLQNNTHLHPLYDSPNQHFRRSKVEDHRPRPDLQLTIIRVKNGWICSDGERQENKESCVHPNHALVEEALKGPEEKEEEDEGNQIWGLKDKSNNLRKGSRFGAETTSGVRPFQVVGRWCEGEKAFPLKKRRGSFERKVGEETVSEKEKKMKSKLKTKTNKECGHEEEEERGDGVDSTSVKKKRWISGVGGSIMEGSRCSRVNGRGWRCCQQTLVGYSLCDHHLGKGRLRSMSSVRSRSSSVSRAKKEEEAGSLSSLSSQQQKGLEDEEVCEEEEEEKPLMIIRNKRKKIGMVKARSISSLLGQPPAHKSNNMIV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00230 377 ProSiteProfiles WRC domain profile. 255 299 IPR014977 -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 61 75 - -
Eupl01g00230 377 Pfam WRC 257 297 IPR014977 -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 135 154 - -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 198 242 - -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 19 79 - -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 135 149 - -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 293 340 - -
Eupl01g00230 377 PANTHER EXPRESSED PROTEIN-RELATED 153 364 - -
Eupl01g00230 377 MobiDBLite consensus disorder prediction 198 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00230 Eupl-Chr1 7323074 7325154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00230 247 293 GRF Transcription Factor Family AT3G52910 40.426 5.56e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00230 - - nnu:104603562 248.054