Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00213 ATGTTTTCTTGGTTGGGAAGGCTCGCTTCGGCGTGCTTGCGTCCGGTTCGGCGGTACGGTCATATTAGCAGGGAGGATGAGGACACAGCAGCGGACGACGAGCTGCTTTGGTACCGAGAACTCGACAGACATTCCTTGGGCGAATTCTCCATCGCCGTCGTCCAAGGCAACCACACTCTTGAGGATCACAGCCGAGTCGAGACCAGCCACGATGCTACCTTCGTTGGCGTCTACGATGGCCACGGTGGTCCTGATGCTTCCCACTTCGTCTGTGATTATCTGTTTCTTCATCTGACGAGGCTTGCTCAAGAAAATGGAACTATGTCTGAAGATGTTCTTAGAAATGCTTTTTCTGCAACAGAGGATCAATTTTTTGCTCATGTGAGCAAAACATATCAAAGAGAACCGTTAATTGCTGCGGTTGGATCTTGTTGTTTGGTTGGGGTTATCTGGAGAGGAACATTATATGTTGCTAACTTGGGTGATTCTCGAGCTATAATAGGTTGTTTAGGTAGGTCAAATAACATTGTTGCAGAGCAGTTGACAAAGGATCATAATGCAAGTATGGAGGAGGTTAGACAAGAACTTATGTCCTCACATCCTGATGATTCAAATATCGTAGTTCTAAAGGAAGGAATATGGCGTGTCAAAGGCATCATCCAGGTATCTAGATCTATAGGGGATGCATACTTGAAGAAGTCGGAGTTTTCTCTTGACGAATCATTCCCACGTTTCCATCTCTCAGAACCCCTTGTCCGACCTGTTCTAACGGCAGAACCATCCATATGTACAAGAGTGATAAGACCCCAAGATAAATTCCTGATATTTGCATCAGATGGGCTTTGGGAACACATGACAAACCAGGTTGCAGCTGAGATTGTATATAACTTCCCACGAGCAGGAATAGCAAGAAGACTCATCATAACAGCTTTAAATGAGGCAGCTAAGAAGTCACCAGCTGCTACCTACAATGAAGTTAAGAAGTTTGGAAAAGGACTTCGGCGGTACTTCCACGATGATATTACAGTTGTTGTAATCTTCATAGACAAACATGAATTGCTGAGAAAAAGGACAGCTGTAGCAGATATGTCAGTACGAGGGTTTATTGACACAGTTGGACCATCTGATTTTTCTGTATTGGAGGGGATTGATGTGAATTCAAGCTCTACACAGCGCACCCAGACTTGA 1188 0.4478 MFSWLGRLASACLRPVRRYGHISREDEDTAADDELLWYRELDRHSLGEFSIAVVQGNHTLEDHSRVETSHDATFVGVYDGHGGPDASHFVCDYLFLHLTRLAQENGTMSEDVLRNAFSATEDQFFAHVSKTYQREPLIAAVGSCCLVGVIWRGTLYVANLGDSRAIIGCLGRSNNIVAEQLTKDHNASMEEVRQELMSSHPDDSNIVVLKEGIWRVKGIIQVSRSIGDAYLKKSEFSLDESFPRFHLSEPLVRPVLTAEPSICTRVIRPQDKFLIFASDGLWEHMTNQVAAEIVYNFPRAGIARRLIITALNEAAKKSPAATYNEVKKFGKGLRRYFHDDITVVVIFIDKHELLRKRTAVADMSVRGFIDTVGPSDFSVLEGIDVNSSSTQRTQT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00213 395 CDD PP2Cc 49 348 IPR001932 -
Eupl01g00213 395 PANTHER PROTEIN PHOSPHATASE 46 346 IPR015655 GO:0004722|GO:0006470
Eupl01g00213 395 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Eupl01g00213 395 FunFam Probable protein phosphatase 2C 42 39 356 - -
Eupl01g00213 395 SMART PP2C_4 28 346 IPR001932 -
Eupl01g00213 395 Pfam Protein phosphatase 2C 57 311 IPR001932 -
Eupl01g00213 395 SUPERFAMILY PP2C-like 54 349 IPR036457 -
Eupl01g00213 395 ProSiteProfiles PPM-type phosphatase domain profile. 48 348 IPR001932 -
Eupl01g00213 395 Gene3D - 25 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00213 Eupl-Chr1 7059423 7063097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00213 1 380 PP2C-type Phosphatase Gene Family AT5G06750 62.500 3.32e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00213 K01102 - ming:122068578 570.852