Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00208 ATGGAAGCCATGGAAATCGACGCAGCGAACAATCTTCAGAGGAAACAGTCCCTCTATCAATCTCTGGACGAGGGGTTCAAGATTCAGACGGAGAAGTACAAAGGTCAGCAGTACAGTCAGATTTACTTCGCTCGGCTTCACCATATGAGAAATCTTCTTTACTCTCTCGTTGAGAAATGGAAACCCTCTTTACCGGTTTGTACTGTTTTAGAGCTCGAAGGAGGCAAAGAATGCATTATTGTTGGAACTCTGTACAAACACATGAAGCTCAAGCCTTCTATTCTTGATGAATACTCTAAGGAGAGATCTGCAGTTCCTGTTGTTAAACCTCATAATTTCGTGCACCCCGATGACCAGCTTGTTTTGGAAGATGAGAGTGGCAGAGTTAAACTTGGGGGGAGTGTGCTTGTGCCATCTCTATTTGTGACAGGTCTTGTAGTGGCTGTTCACGGAAAAGAAACCCATGCTGGTGATTTCTTGGTTCAAGATGTTCTAGAAGCCGGCTTACCCCCTCAAATCGAACTGCCACTTGATTCAAGAGAAGACAAGTATGTGGTTTTTGTATCGGGGCTGAGTGTTGGGAGTGGCACCTGTAATCCTCTCCAATTCCAGCTTCTTGTGGACCATATTACAGGACATTTAGGGGATGAGAAGGAGCAAACCATTGCATCAAAAATAATTCGTGTAGTTATTGCTGGGAATTCTGTCGAAGTTCCGCTTGGACTTCTTAATGGACAGACTTTAGCTGCTAAAGATCAGTCCAGGTTTTCTGAGCCAATCAAAGAGCTTGATATCTTGTTAACTCAGCTTGCAGCAGCTGTGCCTTTGGATGTCATGCCCGGACCCAGTGACCCAGCGAACTTCGCCTTACCCCAACAGCCTTTGCATAGGTGCCTTTTCCCTGGTACATCAGCATATAACACTTTTGTGTCATGTACAAACCCTCATTTATTCGAGCTTGACAATGTCAGATTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGATAAGTACTCAGAAGCAAAAGATAGACTTGATTTTATGGAGAGGACATTAAGGTGGAGGCATCTAGCACCAACAGCACCTAACACCCTTGGTTGTTATCCATTCACTGATAGAGATCCTTTCTTCGTGGAGAGCTGTCCTCATGTTTACTTTGTCGGTAATCAGAATAAATACAAGACTCGTTTATTAAGAGGATCAGAGGGTCAGATGGTAAGACTCATCTGCATTCCTAAATTTTGTGAGACAGGAGTTGCCATTGTGCTAAACACGAGGAATCTTGAATGCCATACTCTCAGTTTCTCAACACACTTGGATTCGTAA 1329 0.4364 MEAMEIDAANNLQRKQSLYQSLDEGFKIQTEKYKGQQYSQIYFARLHHMRNLLYSLVEKWKPSLPVCTVLELEGGKECIIVGTLYKHMKLKPSILDEYSKERSAVPVVKPHNFVHPDDQLVLEDESGRVKLGGSVLVPSLFVTGLVVAVHGKETHAGDFLVQDVLEAGLPPQIELPLDSREDKYVVFVSGLSVGSGTCNPLQFQLLVDHITGHLGDEKEQTIASKIIRVVIAGNSVEVPLGLLNGQTLAAKDQSRFSEPIKELDILLTQLAAAVPLDVMPGPSDPANFALPQQPLHRCLFPGTSAYNTFVSCTNPHLFELDNVRFLGTSGQNIDDLDKYSEAKDRLDFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFVESCPHVYFVGNQNKYKTRLLRGSEGQMVRLICIPKFCETGVAIVLNTRNLECHTLSFSTHLDS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00208 442 Pfam DNA polymerase delta subunit OB-fold domain 37 164 IPR040663 -
Eupl01g00208 442 CDD MPP_PolD2_C 184 436 IPR041863 -
Eupl01g00208 442 Pfam DNA polymerase alpha/epsilon subunit B 185 394 IPR007185 GO:0003677|GO:0006260
Eupl01g00208 442 FunFam DNA polymerase delta subunit 2 43 167 - -
Eupl01g00208 442 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 9 436 IPR024826 -
Eupl01g00208 442 FunFam DNA polymerase delta small subunit 170 442 - -
Eupl01g00208 442 Gene3D - 43 167 - -
Eupl01g00208 442 Gene3D - 177 441 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00208 4 441 Core DNA Replication Machinery Family AT2G42120 74.886 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00208 K02328 - nnu:104601594 766.918