Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00188 ATGGACTTCCAAGTGGTCGTCCTCGCGGGCGGTTCTTCAAAGAAGCTCGTTCCTCTCGTTTCCAATGAGGTCCCAAAGGCGCTGCTTCCGGTTGCTAATCGCCCTGTTCTCTCTTACATTCTAGAGCTCTTGGAAGCCAGTAACCTCAAGGATCTCATCGTTGTTGTTGAAGGTGAAGATGCGGCTCGTCGTGTCGGTGGTTGGATATCCGGCGCCTACGTCGATCGCCTTCATGTCGAGGTAGCTGCAGTCCCTGAAGATGTTGGAACTGCCGGTGCTCTTCGTGCTGTTGCACACCACCTTACTGCAAATGACATCTTGGTTGTAAGTGGAGATCTTGTTTGTGATGTGCCTCCTGGAGCTGTTGCAGCTGCTCATAGAAGACACGATGCAGTAGTAACTGCAATGTTGTGTACTGCCCCTGTTAGTGGACCCTCAGAAATGGGATCTTCTGGTGGGAAGGACAAGGCCAAAAAACCAGGACGGTACAATATAATTGGGTTGGACCCCACAAGACAATTCTTATTGTTTGTAGCCACAGGTGCTGAGGTTGAGAAAGATATACGAGTTCAAAAGAGCATACTCCGTGCTGTAGGCCAGATGGAAATTCGATCTGATCTCATGGATGCTCATTTATATGCATTTAAGAGGTCTGTTCTGCAAGAGGTTTTGGATCAGAAGCCTATGTTTCACAGCATAAAGCAGGATGTATTACCGTATCTTGTGCGGACTCAACTGAGGTCAGAAGCATCAACTAATGGTGCACCCCAAGCAGAAGAAAACTGGAATGAGAAAGTCGCTTCCCAGAGCAACCGAACATGGTTCTCTCGGCACCTGGCTAGTGCCACTCCCACTAGCTTTCATGAGCTCTATGCTTTTGGTCCTAATGGTTCTGCTCCTGCTCCACTAAGGACACATAAATGCTGTGCCTACATTGCCAGTAAGAGCAAGTACTGTGCGCGGCTAAATTCTATCCAAGCTTTTAGTGACATAAATCGAGATGTAATAGGAGAGGCGAGTCATCTCTCAGGGTGTCCTTTTTCCGTCCATAACAACATCATCCATCCGAGAGCAGAGCTTGGATCAAAAACTACTGTTGGACCACAATGCATGCTTGGGGAAGGTTCACAACTGGGTGACAAATGTAGCGTCAAACGATCTGTCATTGGTCGTCACTGCAGGATCGGTTCCAATGTAAAGGTTGTTAATTCGGTTGTGATGAACCATGTTACCATCGGGGATGGGTGTTCAATCCAGGGTTCCGTTATTTGCAGTAACGTGCAGCTCCAAGAGCGTGTGGTTTTGAAAGATTGTCAGGTCGGAGCAGGTTTTGTTGTTACTGCTGGCAGCGAGCACAAGGGGGAGTCATTGGCAAGAAAATAG 1383 0.4808 MDFQVVVLAGGSSKKLVPLVSNEVPKALLPVANRPVLSYILELLEASNLKDLIVVVEGEDAARRVGGWISGAYVDRLHVEVAAVPEDVGTAGALRAVAHHLTANDILVVSGDLVCDVPPGAVAAAHRRHDAVVTAMLCTAPVSGPSEMGSSGGKDKAKKPGRYNIIGLDPTRQFLLFVATGAEVEKDIRVQKSILRAVGQMEIRSDLMDAHLYAFKRSVLQEVLDQKPMFHSIKQDVLPYLVRTQLRSEASTNGAPQAEENWNEKVASQSNRTWFSRHLASATPTSFHELYAFGPNGSAPAPLRTHKCCAYIASKSKYCARLNSIQAFSDINRDVIGEASHLSGCPFSVHNNIIHPRAELGSKTTVGPQCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNVQLQERVVLKDCQVGAGFVVTAGSEHKGESLARK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00188 460 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 460 - -
Eupl01g00188 460 Pfam Nucleotidyl transferase 6 149 IPR005835 GO:0009058
Eupl01g00188 460 Gene3D Hexapeptide repeat proteins 363 457 - -
Eupl01g00188 460 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 341 IPR029044 -
Eupl01g00188 460 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 426 IPR029044 -
Eupl01g00188 460 CDD eIF-2B_gamma_N 3 220 - -
Eupl01g00188 460 CDD LbH_eIF2B_gamma_C 371 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00188 316 451 Eukaryotic Initiation Factors Gene Family AT2G34970 28.758 3.46e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00188 K03241 - nnu:104590308 781.556