Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00178 ATGTCATTGTGCTTTAGAATTCCAAAGAAAGAAGAATTTAAAAAGAATGTTTTCTCTAAAAGGGAAAGATTCTGGTTGCGGAACGGCAGTCGGTTATTAGCAGAGTTGATTGCTTCTTGTGATGGAAAATCTAATCCCATCCGTAACTTCTCCGCTAAAGAACTTGAGGACGCAACCAACAATTATGATGGAGATCGCCTTCTATATGAGCACCAGGGTTATAGATTGTACAAGGGAAACCACGAAGACCGCATTATTCTTATCAAGAAGTTTAAAGATACACCAGAGAACTATAGATTTCGAGAACAATATATAAATGAGATTGCCATACTCTCACAAATCAATCATAAGAACGTGGTGAAGCTCTTGGGCTGTTGCATAGAGACCTATTTACCTATTCAGGTTTACGAATTTGGCTTCAAAGGATTTCTCTCTGATCTTATTCATGAAGATGAGATGGATGACTCTTCAAGAACTAGTTTGCTACTATCATGGGGGAGTAGGTTAAGGATTGCAACTGAGATTGCATATGCAATTACCTATATTCACACTGGCATTTCGAAGCCCATCATCCACAGGGACATAAATTCTAGTAATATTTTATTGGATGAACAAAATGTTGCCAAACTATCAGGTTTTTACTTCTCATGTAAAATTCCTTTTGGTGAAACACATGTAGAAGATTCAGTGAAAGGGAGTTTCGGGTACCTTGATCCTGAGTATTTTAGAACACAACGAGTATCAGAGAAGTCAGACGTTTATGGCTTCGGAATAATTCTACTTGAGCTTTTAACGGGACGGAGGGCTTTATCAATAAAGGAGCATGCTTATGTATTATTGGACCATGTGAAATCCTTCATGAGAGACAATCGTCTTAGCGAGATTGTATCGCCTATCATTAGTGAGGAGAAACGCAATGGGATCGATCAGCAATTGCAAGCATTTGCAGAGCTTGCCATGAGATGCACAAATGATTTACAAGAGGGCAGACCAACAATGATGGAAGTGGCGAAAGAGCTCAGGCAAATTACAAGGTGTGTACAGCCACGTTAA 1053 0.3913 MSLCFRIPKKEEFKKNVFSKRERFWLRNGSRLLAELIASCDGKSNPIRNFSAKELEDATNNYDGDRLLYEHQGYRLYKGNHEDRIILIKKFKDTPENYRFREQYINEIAILSQINHKNVVKLLGCCIETYLPIQVYEFGFKGFLSDLIHEDEMDDSSRTSLLLSWGSRLRIATEIAYAITYIHTGISKPIIHRDINSSNILLDEQNVAKLSGFYFSCKIPFGETHVEDSVKGSFGYLDPEYFRTQRVSEKSDVYGFGIILLELLTGRRALSIKEHAYVLLDHVKSFMRDNRLSEIVSPIISEEKRNGIDQQLQAFAELAMRCTNDLQEGRPTMMEVAKELRQITRCVQPR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00178 350 Gene3D Phosphorylase Kinase; domain 1 38 138 - -
Eupl01g00178 350 Gene3D Transferase(Phosphotransferase) domain 1 141 348 - -
Eupl01g00178 350 ProSiteProfiles Protein kinase domain profile. 62 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00178 350 Pfam Protein tyrosine and serine/threonine kinase 78 340 IPR001245 GO:0004672|GO:0006468
Eupl01g00178 350 SUPERFAMILY Protein kinase-like (PK-like) 45 340 IPR011009 -
Eupl01g00178 350 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 343 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00178 Eupl-Chr1 5705845 5707510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00178 14 343 Receptor kinase-like Gene Family AT1G16130 42.342 2.10e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl01g00178 PK_Tyr_Ser-Thr 9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00178 - - tss:122661809 338.191