Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00175 ATGGCCGTTTCTTCCTTCAAATTCTTCTCAGAAACTGAGATTCAAGGTATAAGCGAGAAGGAAATCGGAACCCAAGGCCTAAGAAAACGGATTCTCCAACAGGGGAGTTCATGGAGAACTCCATTCCCCGGTGATGAAGTTGAAGTCCATTACAGTGGTCGCATTGACGGCGGACCGACTTTTGATTCGAGCTGGGATAGAGGTACCCCATTCAGATTCAAATTAGGCCAATGTGAAGTTATCAAAGGATGGGATGATGGGGTTGCCACCATGAAGAAGGGAGAGAGGGCAATCTTCATTATTCCTCCTAAATTGGCTTATGGGGAAGTGGGTTGTCCACCTATGATTCCGCCCAATTCGACACTTGTTTTCGATGTGGAGATGCTGTCATGGATCACCATCAGGGACCTGTCTGGTGATGGAGGAATATTGAAGAAGATACTAAGAGATGGTGATGGATGGGCTACTCCCAAAGACGCCGATGAAGTGTTCGTTAAGTATGAAGCAAGGCTAGAGAATGGAAGTCTTGTCTCCAAGTCTAATGAGGGTGTGGAATTTTCTGTCAGTGATGGTTATCTATGTCCTGCAATTGGAAAAGCTGTTAAGACAATGAGGAAAGGCGAGAAAGCAGAGTTGTTGGTGAAGTTTTCATATGGAATTGGTCAAAATGGGATTGAAGCAACTAGAAGTGGTTCTGGGGTTCCATCCAATTCAAATTTAACTATTGATCTTGAGCTTGTGTCATGGAAGAGTGTGATTGATGTCACAGAGGACAAGAAGGTAACTAAAAAGATTATAAGAGTAGGTGAAGGTTATGGCTGCCCCAATGAAGGATCCCTAGTGAAAGTAAAATACACAGGTAAACTTGAAGATGGAACAGTTAATGAGAGGAAAGGATCTGATGATAATCCTTTTGAATTTATGTGTTTTGAAGAACAAATCCATGAGGGTTTAGATAGGGCAATCATGACCATGAAAAAAGGTGAAAGAGCACTAGTGACCATCTGCTCTGACTACGGTTATGACGTTGTAGGCTCGGAAGTGGTTCCTGCAAATGCAACGCTTCTATATGAAGTGGAGTTGATTAGCTTTACTAAGGAAAAGCCATACTGGGAGATGAAAACAGCTGAGAAATTAGAGGCCTGTGAGAGAAAGAAAGATGATGGAAACAAACTGTTCAAGGCTGGGAAGTTTTGGAGTGCCTCCAAGAAATATGAGAAGGAAAGTTATTTATGA 1236 0.4256 MAVSSFKFFSETEIQGISEKEIGTQGLRKRILQQGSSWRTPFPGDEVEVHYSGRIDGGPTFDSSWDRGTPFRFKLGQCEVIKGWDDGVATMKKGERAIFIIPPKLAYGEVGCPPMIPPNSTLVFDVEMLSWITIRDLSGDGGILKKILRDGDGWATPKDADEVFVKYEARLENGSLVSKSNEGVEFSVSDGYLCPAIGKAVKTMRKGEKAELLVKFSYGIGQNGIEATRSGSGVPSNSNLTIDLELVSWKSVIDVTEDKKVTKKIIRVGEGYGCPNEGSLVKVKYTGKLEDGTVNERKGSDDNPFEFMCFEEQIHEGLDRAIMTMKKGERALVTICSDYGYDVVGSEVVPANATLLYEVELISFTKEKPYWEMKTAEKLEACERKKDDGNKLFKAGKFWSASKKYEKESYL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00175 411 SUPERFAMILY FKBP-like 256 384 - -
Eupl01g00175 411 Gene3D - 135 249 IPR046357 GO:0003755
Eupl01g00175 411 Gene3D Tetratricopeptide repeat domain 368 411 IPR011990 GO:0005515
Eupl01g00175 411 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 44 132 IPR001179 GO:0003755
Eupl01g00175 411 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 278 365 IPR001179 GO:0003755
Eupl01g00175 411 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 141 252 - -
Eupl01g00175 411 FunFam Peptidyl-prolyl cis-trans isomerase 19 132 - -
Eupl01g00175 411 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 275 362 IPR001179 GO:0003755
Eupl01g00175 411 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 129 IPR001179 GO:0003755
Eupl01g00175 411 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 156 247 IPR001179 GO:0003755
Eupl01g00175 411 Gene3D - 15 134 IPR046357 GO:0003755
Eupl01g00175 411 SUPERFAMILY FKBP-like 23 133 - -
Eupl01g00175 411 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 160 250 IPR001179 GO:0003755
Eupl01g00175 411 Gene3D - 250 367 IPR046357 GO:0003755
Eupl01g00175 411 SUPERFAMILY FKBP-like 137 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00175 Eupl-Chr1 5678734 5682474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00175 19 407 Calmodulin-binding Proteins AT5G48570 56.927 9.49e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00175 - - nnu:104588271 619.002