Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00163 ATGGATTCCCAAGTGAAGCTCGCGGTTGTTGTCAAGGTGATGGGACGAACCGGTTCGAGAGGGCAGATCTTCGGTATTCGATTTGGAATTCGTGCAATGGCGACAAAGTTCGAGTTAAGGAAATTTGACCGATTAAAATACTTTAGCTTATGGCGTTTTAAGAGGCGTGCTCTGTTAGTTCGACATGGATTGTTGAAAGCATTGAAGGATAGAGACGCTCAGCCGGAGGCGATGTCGGATGAAGGCAAGGAAGAGAAGCTGGAGAAAGATGAGGAAGGGGTGCAAGACATTATTGAAGAGAATGAAACACCACAACATCAAGAGTATAATCTTGTTATGTAG 342 0.4474 MDSQVKLAVVVKVMGRTGSRGQIFGIRFGIRAMATKFELRKFDRLKYFSLWRFKRRALLVRHGLLKALKDRDAQPEAMSDEGKEEKLEKDEEGVQDIIEENETPQHQEYNLVM* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00163 113 MobiDBLite consensus disorder prediction 71 103 - -
Eupl01g00163 113 Gene3D - 1 41 IPR012340 -
Eupl01g00163 113 MobiDBLite consensus disorder prediction 71 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00163 Eupl-Chr1 5350736 5356214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00163 1 28 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 75.000 2.75e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00163 K02979 - pvy:116118767 50.0618