Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00160 ATGTGGAATAAAGGGATCTCTATATTTATCGATTTTTCGTCTCGATGGGGAAAGTTGAAGAGGAACAATCACTTTCTTCTGCTGTTGTTGCAGAAATCACGGAGGAGCGAAATGTGGAAAATCCGTGTCGAGAGATTCCCAAATTCGTGCGATTTAGATGCGTTATCGCACTCGTTTTCGGCGCCGCTGTGTTCTTATCCGCTATCTTTTGGTTGCCCCCGTTTTTGCGCTCATAATATAGTAGCAAGTTTTAAACTGCAAAAGCCGGTATCTCTGCTGAATGCAAATATTCTAAAGCTTGAGTACAGCATCTTTGAAGAAATAGGGGTTCCCAACTCCACGGTGGTTGTTATATCTCTTGAACCTGCGGCTGGATCAAATGCGACGAACGTGGTGTTTGGGGTTGTGCCTTACCCAAAATACTCGATCATATCTTCAGCTAGCAAAAGTGTACTCAGGTCCTCTTTTGTATCATTGGTTATACAGCAATCATCTCTCCACTTGACTCCATCCTTGTTTGGTGATGCATTCTCCTTTGAGGTGCTAAAATTCCGGGGAGGAATTACTGTTATCCCTCCACAGCATGCTTTTCTTCTGCAGAAAGTGCAGATCCTTTTCAACTTCACCTTAAACTTCTCTATTTTTCAACTACAAGAAAATTTCAACGAGTTAAAGAATCAATTGAAGTCGGGGTTGAATCTCACTCCATATGAGAATTTGTATGTTAGCTTGACGAATTTGTACGGGTCAACAGTGACTTCGCCTACTACCGTTCAGGCATCTGTCCTGCTCACGATAGGGAATTCTCCTCCCCCGCTGCCAAGGTTGAAGCAGTTGGCTCAAACCATCACAGGTTCTCCTGCGAAAAACCTTGGCCTCAATAACACAGTATTTGGTAGAGTTAAGCAGGTTCGGCTCTCATCTGTTCTGCAACACTCCCTCAATACTGGTGGCAGTAGTGGCACATCTTGGTCACCTAGTCCAGCTCCTCTTCCTTATCCAAACCACGGACATCACCACCACCACCACCACCACTATCGGCGCCATCCTCAGCAGCATCACCATGATTTCCAGCAGGTTCCTTCATCTGCACCTACACCTGCACCTGCACCTGTGCCTGTGAAAAGCTACCAGGCAAAGCCTCCCTCTGGTTGCCGAATTGGATCTACGAGGAAGGCCAAGAGACGAACTCATTTAGTCCCTGCTGCTGCACCTGTGATTTCTCCACGCCATTCTCCTGTCTCAACACTTCCACATGTGGACCCACCTGCTCCGGCCTCACATCCGCTTCCTGCATCTTCTCCTATACCAGCCGTGGCTTTTGCTCACGCTCAGCCTCCTAGTGAGGGCATACCAAATGTAGGGCCTCTCGATGTAGCGCCATCGGTTTCACCATTGCCATCTTCATCTTCTGCAGGTCTTCTTCCTCCTGTTCACTGGTCATTTGCACTGCTTCTACCTATGGTAATATATTTATTATGA 1482 0.4683 MWNKGISIFIDFSSRWGKLKRNNHFLLLLLQKSRRSEMWKIRVERFPNSCDLDALSHSFSAPLCSYPLSFGCPRFCAHNIVASFKLQKPVSLLNANILKLEYSIFEEIGVPNSTVVVISLEPAAGSNATNVVFGVVPYPKYSIISSASKSVLRSSFVSLVIQQSSLHLTPSLFGDAFSFEVLKFRGGITVIPPQHAFLLQKVQILFNFTLNFSIFQLQENFNELKNQLKSGLNLTPYENLYVSLTNLYGSTVTSPTTVQASVLLTIGNSPPPLPRLKQLAQTITGSPAKNLGLNNTVFGRVKQVRLSSVLQHSLNTGGSSGTSWSPSPAPLPYPNHGHHHHHHHHYRRHPQQHHHDFQQVPSSAPTPAPAPVPVKSYQAKPPSGCRIGSTRKAKRRTHLVPAAAPVISPRHSPVSTLPHVDPPAPASHPLPASSPIPAVAFAHAQPPSEGIPNVGPLDVAPSVSPLPSSSSAGLLPPVHWSFALLLPMVIYLL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00160 493 MobiDBLite consensus disorder prediction 313 396 - -
Eupl01g00160 493 PANTHER F20B24.21 75 484 - -
Eupl01g00160 493 MobiDBLite consensus disorder prediction 335 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00160 Eupl-Chr1 5268779 5279339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00160 73 310 C3H Transcription Factor Family AT3G10810 59.244 2.01e-82 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00160 - - nnu:104604184 446.047