Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00155 ATGTCCACGGAAGCTCAGAGGGTGGTGGTGATCCAGGATGCATCAAAAGAAGTTAGTTCGAGCGCAATCGAATGGGCCCTGGAAGGCTTATCACTGAAACCTGGAGATAAAATCACTCTTCTCGGAGTTCTTCACCAGGTTAATACCCCTAGTACGTTATCTTTCATGGGAGCTGGGAAACTGTTGGGATACAAGAGCAAAGTGGACAGTTCAATGTTTGGAGCAAACCAGAAAATTGTCGAGGAAGAAGTTGCAAAGAGAGAGGAAGAGTATCATAACAATATGGAGCTTATGAAGATTTCTAAAGTGTATGGAATGTACAAGATTGACTTTGATATAGCAGTAAAAGTTGGACCTTCACCAAAGATAGTTGCTCTACAAGCTGCCAAGAATTTAAGGGCAACATGGATAATACTTGACAGGCAGATGAAGAAAGATAAGAAGTACTTCATGGAGAAGCTGTCATGTGGCATATCAAGGATGAAGCGCGATAACAGCGTTGAAAAGCTGAGAGGCCCCAAAGCAATTGGAATCAACAAAATGTCCACCGAGGCAAGCCGGAGCAGCCAAGTAACATATGATGAGATGATACCAGGATCCCCAGAGGACGAAGAGCTTTTCAGCTTGGAACTTTCTCCAATAAAATCTCCAAGTCCTTCCAAGACCATCTTAGACGAAGAGCAAGGAGTTGAGGTTGGTGAAGGACCTGCATGGAATAATGCTTGGAAGATGGTTTCATCTTCTAAATCCTCGTCAAGTGAGAATCTCATGTTGACGAAGACAATATCAAGTTCAAGCCTGGGGAACACTGAGGCTTCGAGCTCAAGTTTTAACGAGGCAAAGTGCTCCCCCTTGCACCTTCAAGAGGACGAAAACAATATAAACACACACAGTGAAACAGTGGAAGTGGTATCTCCAAATTCCATTTCTGATAGTCAAGAGATGGTCCAAACAGAAGCTAATGAAATAGGGCCTCAAGATCAAGAACCGAAGTGGAGCAGAACCGATGAGCAGGAGTCTCTGAGACTTGGACTTGCAGGGTGGCAGACTGAAGAAACATTTGAGAATTCCATTTGTTCAGTCTGTAAGAACAAACGACCAAAGATTGGATGGAAGAGGGATTTTACATATGCCGAGCTCCAAGCTGCTACAAATGGGTTTTCCCCAAAAAATTTTCTATCTGAAGGTGGATTTGGTTCTGTTTACAAAGGGACGCTAAGCGATGGTCCAAAAATTGCTGTTAAGCAACATAAAGATGCAAGCTTGCAAGGAGAGAAGGAATTCAAGTCAGAGGTTCATGTACTCAGCAAGGCCAGACATAGGAATGTGGTCATGCTGCTTGGGTCGTGTTCTGAAGGAAGTCAGAGGCTGCTTGTTTATGAGTACGTCTGCAATGGTTCACTGGACCAACATCTATCAAAACACAGCCGCAAACCTTTGAGTTGGGAAGACAGGATGAAAATAGCACTGGGAGCTGCAAGTGGTTTAAACTATCTGCACGAAAACAACATCATCCACAGAGATATGAGGCCAAACAACATTCTTGTAACCCATGACCACGAACCCCTGGCAAGACCACTTTTGAAAGAAAGGAAGTATCCAGATTTAATAGACTCCAGGATCCTAGAGTCGCATGACGTTCACCAACTCTTTTGGATGGTTCGGGTAGCTGAAAAATGCCTCAGCAAGGATCCTGACAAACGGCTATCCATGGGAAAGGTGGTGTTCGCATTAACATACATAACAAATGGGGAAACAGTTTGTGGTATCGAAGACTTCTCCCCGGCACTCTCCGATTCAGTCAGTAGCATACCCGAGTCCAATGAATCACAAAGTGATGAAGGAACTATTGAACAGGGGAGACTTAGCACAGAAGTACAATCAATTAGTAGCATAAGTCGGACGAGTGGATTGTTTTCACCCACATCTTCAACGCGGACCTTTACAACAAGATCATCAAACATATCCACAGGTTCTGAAAGCCCATTTTGGGGTAGTGGAAAGAGTAACAAGAAGACAGAAAAAGAAAAATCTCAAAATAAAATTCAAGTATTTTACGGGGAGATGCTCAGTTAA 2076 0.435 MSTEAQRVVVIQDASKEVSSSAIEWALEGLSLKPGDKITLLGVLHQVNTPSTLSFMGAGKLLGYKSKVDSSMFGANQKIVEEEVAKREEEYHNNMELMKISKVYGMYKIDFDIAVKVGPSPKIVALQAAKNLRATWIILDRQMKKDKKYFMEKLSCGISRMKRDNSVEKLRGPKAIGINKMSTEASRSSQVTYDEMIPGSPEDEELFSLELSPIKSPSPSKTILDEEQGVEVGEGPAWNNAWKMVSSSKSSSSENLMLTKTISSSSLGNTEASSSSFNEAKCSPLHLQEDENNINTHSETVEVVSPNSISDSQEMVQTEANEIGPQDQEPKWSRTDEQESLRLGLAGWQTEETFENSICSVCKNKRPKIGWKRDFTYAELQAATNGFSPKNFLSEGGFGSVYKGTLSDGPKIAVKQHKDASLQGEKEFKSEVHVLSKARHRNVVMLLGSCSEGSQRLLVYEYVCNGSLDQHLSKHSRKPLSWEDRMKIALGAASGLNYLHENNIIHRDMRPNNILVTHDHEPLARPLLKERKYPDLIDSRILESHDVHQLFWMVRVAEKCLSKDPDKRLSMGKVVFALTYITNGETVCGIEDFSPALSDSVSSIPESNESQSDEGTIEQGRLSTEVQSISSISRTSGLFSPTSSTRTFTTRSSNISTGSESPFWGSGKSNKKTEKEKSQNKIQVFYGEMLS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00155 691 ProSitePatterns Tyrosine protein kinases specific active-site signature. 504 516 IPR008266 GO:0004672|GO:0006468
Eupl01g00155 691 Pfam Protein tyrosine and serine/threonine kinase 392 520 IPR001245 GO:0004672|GO:0006468
Eupl01g00155 691 MobiDBLite consensus disorder prediction 303 324 - -
Eupl01g00155 691 PANTHER OS01G0750732 PROTEIN 246 523 - -
Eupl01g00155 691 FunFam Proline-rich receptor-like protein kinase PERK8 349 462 - -
Eupl01g00155 691 MobiDBLite consensus disorder prediction 633 679 - -
Eupl01g00155 691 MobiDBLite consensus disorder prediction 599 620 - -
Eupl01g00155 691 Gene3D Transferase(Phosphotransferase) domain 1 523 589 - -
Eupl01g00155 691 Gene3D Transferase(Phosphotransferase) domain 1 463 522 - -
Eupl01g00155 691 Gene3D HUPs 1 157 IPR014729 -
Eupl01g00155 691 MobiDBLite consensus disorder prediction 633 668 - -
Eupl01g00155 691 ProSiteProfiles Protein kinase domain profile. 387 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00155 691 MobiDBLite consensus disorder prediction 303 333 - -
Eupl01g00155 691 SUPERFAMILY Protein kinase-like (PK-like) 374 590 IPR011009 -
Eupl01g00155 691 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00155 Eupl-Chr1 5150534 5159220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00155 375 523 Trihelix Transcription Factor Family AT5G38560 51.316 6.23e-43 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Eupl01g00155 PK_Tyr_Ser-Thr 4.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00155 - - psom:113287414 614.379