Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00150 ATGAGTAGTACAACAAATGAGAGTGAGGACGGAATGCTCTCAAAGGATCAGACGGATTCACCATCAATTGATGAAGATAGTTGTGGAGGAAGCTTGGGACAAGGGGCTGTCCTGAAGAAAGGGCCGTGGACATCTGCAGAAGATGCTATTTTGGTGGATTATGTCAAGAAGCACGGAGAGGGGAATTGGAATGCTGTTCAGAAGCACTCGGGGCTGTTCCGCTGTGGCAAAAGCTGCCGCCTGCGGTGGGCTAATCACCTGAGGCCGAACTTGAGGAAGGGTGCTTTCACAGCAGATGAAGAACGGCTGATCATTGAACTCCATGCCAAGATGGGGAACAAATGGGCTCGGATGGCCGCACATTTGCCTGGGCGTACAGATAATGAGATAAAGAACTACTGGAACACTCGAATCAAGAGACGCCAACGAGCTGGTTTACCTCTTTACCCTCCTGATGTGTGTTTGCAGGCTTTCAATGAGAGTCAGCAGACTCAGAACACTAGTGAATTTAACTGTGGTGATGCCCGCAATCACGACCTCTTGCAAGCAAACAATTACGAGATTCCGGATGTCATTTTCGACAATTTAAAGTCCAATCAAGGGGTTTTGTCTTATGCACCAGCACTTCCTGATATTTCTGTTAGTAGCATGCTGAATCAAGGTCTGGGAGGTCTGGGTTCATCTCAAAATTACTGCTTCATGCCCCCAACAATGCATCGTCCCAAGCGACTTCGAGAATCTGAGACCTTGTTCCCTGGTTTTAATGGTAGTTCCATGAATGTACTCCCACCATTTGACCAGTTTCCGAATGATACTTGTGAAAAGATTAATCATCCCTATGGATTATTTTTTCCATATGATCCCGACCCTAATATCAAAAATCCCCAATCTGTTGGTGTAATGCCTGGCAGCCATGCCCTTTTAAATGGCAATTTCTCTGCTTCCAAGCCCTTTCTGGGGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATACAGAAACTGGTCTTGGTAGCTGGGACACATCTTCCCAGCCACCTTCACTCGAATCTGTTGATGCTTTTATTCAATCTCCCCCGTCAACTGGCCCGGTGCAGTCAGACTGTCTTTCACCACGGAATAGTGGCCTGCTGGATGCATTAATTCACGAGGCACATCATTTTAGCACAAAGAACCAGTCATCTGAGAAGAGCTCACATTCTTGTGTTGGAACACCCAATGATGTAATGGACAGTTCAACCCTGAATATATGTGATACAGAATGGGAAGATTATGGCGATATTTCTCCCTTGGGTTGTTCCACTGCATCTGTTTTCAGTGAATGCACTCCTATCAACGGAAGCTTGTTTGATGAACCCCTTCCCATCAAGGCCTTGCCTGGATCCCATGTTAAGATGGAACCAGTTGAACCTGTATCGAGTGCAGATGAAGGTGCAAGAGACATAGCATCCCAGTTGGATTTTTCTAGGCCTGATGCTCTACTAGGTGGCTGGTTCGAGCAGAGTTCTGAATACGCTAAAGACCAATCCATTGTGACTGAATCTATAGCAACACTTGTTGGTGAAGATATCCGCAGTGATTACAAGCACGTTGCTGCTGGAACATCTACATTAAATCAAGGATGGGGGTTTGGCTCTTATACATGGAATAACATGCCTGCTGTTTGCCAAATGTCTGAACTTCCTTGA 1686 0.462 MSSTTNESEDGMLSKDQTDSPSIDEDSCGGSLGQGAVLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHLRPNLRKGAFTADEERLIIELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPDVCLQAFNESQQTQNTSEFNCGDARNHDLLQANNYEIPDVIFDNLKSNQGVLSYAPALPDISVSSMLNQGLGGLGSSQNYCFMPPTMHRPKRLRESETLFPGFNGSSMNVLPPFDQFPNDTCEKINHPYGLFFPYDPDPNIKNPQSVGVMPGSHALLNGNFSASKPFLGAVKLELPSLQYTETGLGSWDTSSQPPSLESVDAFIQSPPSTGPVQSDCLSPRNSGLLDALIHEAHHFSTKNQSSEKSSHSCVGTPNDVMDSSTLNICDTEWEDYGDISPLGCSTASVFSECTPINGSLFDEPLPIKALPGSHVKMEPVEPVSSADEGARDIASQLDFSRPDALLGGWFEQSSEYAKDQSIVTESIATLVGEDIRSDYKHVAAGTSTLNQGWGFGSYTWNNMPAVCQMSELP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00150 561 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Eupl01g00150 561 SUPERFAMILY Homeodomain-like 39 134 IPR009057 -
Eupl01g00150 561 MobiDBLite consensus disorder prediction 1 27 - -
Eupl01g00150 561 CDD SANT 95 136 IPR001005 -
Eupl01g00150 561 Gene3D - 39 92 - -
Eupl01g00150 561 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Eupl01g00150 561 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 529 - -
Eupl01g00150 561 Gene3D - 95 141 - -
Eupl01g00150 561 FunFam Transcription factor MYB97 95 170 - -
Eupl01g00150 561 FunFam MYB-related transcription factor 39 92 - -
Eupl01g00150 561 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 87 IPR017930 -
Eupl01g00150 561 MobiDBLite consensus disorder prediction 1 31 - -
Eupl01g00150 561 CDD SANT 42 87 IPR001005 -
Eupl01g00150 561 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Eupl01g00150 561 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Eupl01g00150 561 SMART sant 92 140 IPR001005 -
Eupl01g00150 561 SMART sant 39 89 IPR001005 -
Eupl01g00150 561 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00150 Eupl-Chr1 5012028 5022077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00150 16 561 MYB Transcription Factor Family AT5G06100 43.502 3.94e-130 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g00150 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00150 K09422 - nnu:104604178 808.905