Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00130 ATGGCTAGAATCCGACTGGTTCTATCAGATTTCCTGATTTCCTTCATGTGGGTATGGTCAGGAGCTCTCATCAAGTTCTTCGTCTACAAGTTTCTGGGGTTAGGGTTACAACCCAAAGGAGAGATCCTCAAGGGCTCTCTCTCCATCTTGAGTATGTTCTTCTTTGCATGGGTGGGGAAGATTAGCAAGGGTGGGTCTTACAATCCTCTCACTGTGTTCTCTTCTGCGATTTCTGGGAATTTCAGTTGGTTTCTTTTCACTGTTTGTGCAAGGATTCCTGCTCAGGTAATCGGGTCTATTACTGGGGTTAGTCTCATCATTGCGACCTTTCCGGAAATAGGCCATGGACCCCGCTTGAATGTCGACATCCATCAAGGCGCATTGACAGAAGGACTTCTCACATTCACAATTGTTATTATATCACTTGGGCTAGCTAGGAGCATCCCCAGCAGCTTTTTCATGAAAACATGGATATCGAGCGTCTCCAAGCTAGCTCTTCATATACTTGGTTCTGATCTAACCGGTGGATGCATGAACCCTGCCTCTGCCATGGGATGGGCTTATGCTCGAGGGGATCATATAACCAAGGAGCATCTATTTGTGTACTGGCTTGCCCCAATTGAGGCAACTCTGTTGGGTGCATGGACATTCAGGTTGCTCGTTCAGCCCCAGAAGCAGGAAGAGAAGATGAACAAGACTAAGTCAGAGTGA 711 0.4698 MARIRLVLSDFLISFMWVWSGALIKFFVYKFLGLGLQPKGEILKGSLSILSMFFFAWVGKISKGGSYNPLTVFSSAISGNFSWFLFTVCARIPAQVIGSITGVSLIIATFPEIGHGPRLNVDIHQGALTEGLLTFTIVIISLGLARSIPSSFFMKTWISSVSKLALHILGSDLTGGCMNPASAMGWAYARGDHITKEHLFVYWLAPIEATLLGAWTFRLLVQPQKQEEKMNKTKSE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00130 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Eupl01g00130 236 Gene3D Glycerol uptake facilitator protein. 2 236 IPR023271 -
Eupl01g00130 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g00130 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g00130 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g00130 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g00130 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g00130 236 SUPERFAMILY Aquaporin-like 4 230 IPR023271 -
Eupl01g00130 236 Pfam Major intrinsic protein 4 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00130 Eupl-Chr1 4420279 4424704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00130 1 236 Major Intrinsic Protein MIP AT3G56950 59.494 1.03e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00130 K09875 - ming:122082173 384.03