Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00124 ATGGCTACCCAACTGAGCCATCGGCTTATTTCATACTCAAAGGAGATTGTAGATGGAGAGTCGATATACGTTTCATCGAATTGTCTTCCTGTTAAGGCCATAAACTTTGAACCTGCCGGGCACGCATTTCATTCGGTGGCACTTAAACTTCGTGGCTTTTGCACAGAAGAAGATGCAGATGCCGATGAGCAGAATGTGTCCAATGATAAGGGCCCGGCTTATATTGCATCATCAGATTCGTATAGCAGTAAAGGAAAAAAGAAATCCGGTGCTAGCGGCAAGCAACAAGACCATTATGCGTTGTTGGGTTTGGGGCATCTACGGTTTCTGGCCACTGAGGAACAGATAAAAAAGAGCTACAGAGAGACTGCCTTAAAGTATCACCCTGACAAACAGGCTGCCCTTCTTCTTGCCGAGGAAACTGAATCTGCAAAGCTAGCAAAGAAAGATGACATAGAAAACTATTTCAAATCCATCCAAGAAGCCTATGAGGTCCTGATAGATCCCGTGAAGAGAAGGATTTATGACTCCACTGATGAATTTGATGATGAAATTCCAACCGACTGTGCTCCACAGGACTTCTTCAAGGTATTCGGTCCGGCATTTATGAGGAATGGGCGGTGGTCGGTTAATCAGTCAGTGCCGTCTTTAGGTGAAGAGAGTACTCCGTTGGGAGAAGTAGATAGTTTCTATGATTTTTGGTATAGCTTTAAAAGCTGGAGAGAATCCCCCCACGAAGATGAGTTTGATCTTGAGCAAGCTGAGTCTCGTGACCATAAGCGATGGATGGAGAGGCAGAATTCCAAACTTAGAGAGAAGGCAAGGAAGGAAGAATATGCTCGGGTACGCACACTTGTTGACAATGCCTATAGGAGGGATCCAAGAATTCTGAGGAGAAAAGAAGAGGAGAAAGCAGAGAAGCAGAGGAAGAAGGAAGCCAAATTCCTGGCAAAGAAGTTGCAGGAGGAAGAGGCTGCCAGGGTTGCCGAAGAGGAGAAACGCCGGAAAGAGGACGAGGATAGACGGGCTGCTGAAGCCTCTTTGAATCAGAGGAAGGTAAAGGAGAAAGAGAAGAAGCTTTTGCGCAAAGAGCGGACTCGTTTACGGACACTCTCAGCACCCCTTGTATCCCAACGTTTGCTTGATCTTGTGGAAGATGACGTGGATCGTGTATGTATGTCATTTGAGATTAATCAGCTGAGGAGTCTATGTGATGAGATTGAGTGCAAGGAAGGGATCGAGCGGGCCCAACTTCTAAAGGATGCATTTGGAGGGAACAATAATTCTGATGGGCCGAAGCAAGATGATAAGAATAACCCACAAAAGAATCGTTCTCTTGAGGTTAATGGAAATGGTGATGGTGTGCAATTCAGGGTGGAGAATCCGTTACGCAGCTATGAGAAAAAAGAGAAACCTTGGGGCAGAGAAGAGGTTGAGCTGTTGAGAAAGGGGATACAGAAGTATCCCAAAGGAACATCTCGGAGGTGGGAGGTTATTTCAGAGTACATTGGTACAGGAAGATCGGTAGAAGAGATTCTTAAGGCAACAAAGACAGTTCTTCTCCAGAAGCCTGACTCTGCCAAAGCTTTTGACTCATTCCTCGAGAAGAGAAAACCAACACAGACCATTGAATCCCCACTGACAAACAGAGAGGAATTAGAGGGGGTAATTACCCCCAGTGATGGGCCTGAAGCCAATGCTCCGAAAATGGTTGTCCCCAAGCCATCTTCGAGCAGTGGTGGGGGCCACCAGAATCCTGAAAGTGGGACAACTGCGAATGGAGTTTCGGTGACTGTGGAACAAGACGTGTGGTCTGCCGTTCAAGAAAGAGCACTGATTCAGGCTCTGAAAACGTTTCCTAAGGAAACCAGTCAGCGTTGGGAACGAGTTGCAGCTGCAGTTCCGGGGAAGACCATGAACCAGTGCAAGAAGAAATTTGCATTGCTAAAGGAGAACTTCAGAAACAAAAAAAATGTGGATTAG 1983 0.4629 MATQLSHRLISYSKEIVDGESIYVSSNCLPVKAINFEPAGHAFHSVALKLRGFCTEEDADADEQNVSNDKGPAYIASSDSYSSKGKKKSGASGKQQDHYALLGLGHLRFLATEEQIKKSYRETALKYHPDKQAALLLAEETESAKLAKKDDIENYFKSIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQSVPSLGEESTPLGEVDSFYDFWYSFKSWRESPHEDEFDLEQAESRDHKRWMERQNSKLREKARKEEYARVRTLVDNAYRRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAARVAEEEKRRKEDEDRRAAEASLNQRKVKEKEKKLLRKERTRLRTLSAPLVSQRLLDLVEDDVDRVCMSFEINQLRSLCDEIECKEGIERAQLLKDAFGGNNNSDGPKQDDKNNPQKNRSLEVNGNGDGVQFRVENPLRSYEKKEKPWGREEVELLRKGIQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLQKPDSAKAFDSFLEKRKPTQTIESPLTNREELEGVITPSDGPEANAPKMVVPKPSSSSGGGHQNPESGTTANGVSVTVEQDVWSAVQERALIQALKTFPKETSQRWERVAAAVPGKTMNQCKKKFALLKENFRNKKNVD* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00124 660 PRINTS DnaJ domain signature 120 135 IPR001623 -
Eupl01g00124 660 PRINTS DnaJ domain signature 151 171 IPR001623 -
Eupl01g00124 660 PRINTS DnaJ domain signature 102 120 IPR001623 -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 422 455 - -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 557 596 - -
Eupl01g00124 660 ProSiteProfiles Myb-like domain profile. 596 646 IPR001005 -
Eupl01g00124 660 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 70 89 - -
Eupl01g00124 660 Coils Coil 303 364 - -
Eupl01g00124 660 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Eupl01g00124 660 ProSiteProfiles Myb-like domain profile. 465 520 IPR001005 -
Eupl01g00124 660 Gene3D - 465 523 - -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 577 596 - -
Eupl01g00124 660 SUPERFAMILY Homeodomain-like 466 513 IPR009057 -
Eupl01g00124 660 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 658 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Eupl01g00124 660 ProSiteProfiles SANT domain profile. 599 654 IPR017884 -
Eupl01g00124 660 SMART sant 600 652 IPR001005 -
Eupl01g00124 660 SMART sant 469 522 IPR001005 -
Eupl01g00124 660 CDD DnaJ 97 168 IPR001623 -
Eupl01g00124 660 CDD SANT 472 512 IPR001005 -
Eupl01g00124 660 FunFam Myb family transcription factor 598 658 - -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 61 94 - -
Eupl01g00124 660 MobiDBLite consensus disorder prediction 327 357 - -
Eupl01g00124 660 Pfam Myb-like DNA-binding domain 603 647 IPR001005 -
Eupl01g00124 660 Pfam DnaJ domain 97 176 IPR001623 -
Eupl01g00124 660 SMART dnaj_3 96 171 IPR001623 -
Eupl01g00124 660 Gene3D DnaJ domain 80 189 IPR036869 -
Eupl01g00124 660 Gene3D - 596 660 - -
Eupl01g00124 660 SUPERFAMILY Homeodomain-like 599 651 IPR009057 -
Eupl01g00124 660 CDD SANT 604 650 IPR001005 -
Eupl01g00124 660 SUPERFAMILY Chaperone J-domain 95 203 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00124 Eupl-Chr1 4301619 4308936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00124 98 297 C2H2 Transcription Factor Family AT1G74250 27.917 2.42e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g00124 DnaJ 1.1e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00124 K09522 - nnu:104593549 927.161