Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00104 ATGGAGTCTTCAGAGCCCGAGGAAATAGAAGCGCCAGAGGGTTTGCCACCACCTCCACCGATTCCACCAAATGTAGTTCCATTGCGTGCGGAGTCGGTTAACATCCCTGAGCAAACACCGAAGGTTTCAAGGCCCAAACGTGGCCCAATGGCTAGGTCTGGTCATGGGCGTAAGGGGCAAACAATACAATTGCTTACTAATCATTTTAAAGTTGGTGTTAGGAATGTTGACGGCTACTTTTTCCACTACAGTGTTTCCCTGTTTTACGAGGATGGTCGCCCTGTAGATGGGAAGAGTATCGGTAGAAGAGTGATTGAAAGAGTTCATGACACTTATGATACTGAGCTAGAGGGAAAGGACTTTGCATATGATGGGGAAAAGAGCTTGTTTACTGTTGGTCCTCTCCCACGCAACAAACTCGAGTTCACTGTTGTTCTCGAGGATATGTCATCAAATAGAACTGCTGGGAATGGCAGCCCCGGTGGCAGTGGGAGTCCAAACGAGAGTGAACGGAAGAGGTTAAGACGTCCATACCAGTCCAAAACATTTCAGGTAGAGATAAGTTTTGCAGCCAAAATCCCAATGCAGGCCATTGCAAATGCACTTCGTGGTCAGGAATCAGAGAACTCTCAAGAAGCTCTGAGAGTTCTAGATATCATTTTAAGGCAGCATGCAGCAAAACAGGGTTGCCTTCTTGTCCGTCAATCCTTTTTTCACAACATCCCTAGGAATTTCACTGACTTGGGAGGTGGTGTTCTGGGATGCAGAGGTTTTCATTCAAGTTTTAGAGCCGTCCAGGGCGGTTTATCTCTGAACATTGATGTGTCTACGACAATGATAGTACAGCCTGGACCAGTGGTGGATTTTTTAATTGCCAATCAGAATGTGAGGGATCCCTTTGAGATTGACTGGGCAAAGGCTAAACGGATGCTTAAAAATCTGAGGATAAAGGCAAGTCCCTCCAATATGGAATATAAAATCACCGGATTAAGTGATCTGCCCTGCAACGAACAAGTGTTTTCTTTAAAGCAGAAGAATGGAAGGGACACGAATGGAGATGGCGAGGTCCAAACTATTGAAGTGACGGTCTACGATTACTTTGTTAATTATCGCCATATAGAGTTACGCTTTTCTGCAGGTCTGCCATGCATTAATGTTGGGAAGCCCAAGCGACCAACTTACTTCCCACTTGAGCTTTGTTCGTTAGTTTCCTTACAACGTTATACGAAGGCGTTAACCACTCGCCAGAGATCCTCGCTAGTAGAGAAATCAAGACAGAAGCCCCAAGAAAGGATGACAGTTTTGTCTGATGCATTGAAAAGTAATGATTATGATGCTGACCCGATGTTACGTGCTTGTGGCATTTCAATTAATACTCACTTTACTCAGGTCGAAGGCCGTGTTCTACAGGCCCCAAAGTTGAAACTTGGCAATGGAGAGGATTGTTTTCCTCGAAACGGGCGATGGAACTTTTTAAATAAGAAAATGGTGGAACCAACAAAGATTGAACGTTGGGCTATTGTAAACTTCTCGTCTCGCTGTGATACACGCAAACTAAGTGGGGATGTTATCAGATGTGGAAAAGAGAGAGGAATTCTCATAGATACTCCATTTGATGTATTTGATGAGAATCCGCGGTCAAGACAGGCCCCTCCTCATGTTAGAGTGGAGCAGATGTTTGAACAGATAAAGTCAAAACTTCCAGGGGCCCCCCAGTTTCTTCTCTGTCTTCTCCCAGAGAAGGGTTCCAATATCTATGGACCATGGAAGAGGAAGAATCTTGCAGAGTTTGGAATTGTTAATCAATGCATTGCACCTACAAGAGCTGATGACCGATACCTTACCAATGTTCTCTTGAAGATCAATGCCAAACTTGGCGGTTTGAATACTTTGTTAGCAGTTGAACACTCTCCCTCTATTCCTCTGGTTTCTAAGGTTCCTACCATTATCCTTGGGATGGATGTCTCACATGGCTCTCCTGGTCAGTCTGATGTGCCATCTATTGCTGCGGTAGTCAGCTCCAGGCATTGGCCTTTGATTTCTCGTTATAGAGCATCTGTGAGGACACAGTCACCGAAGGTTGAAATGATAGATTCTCTATATAAGCGAGTATCAGACACAGAGGACGAGGGCATACTTCGGGAGCTATTGCTGGACTTCTATACGAGTTCGGGGAAAAGAAAGCCTGATCAGATAATCATTTTCAGGGATGGCGTCAGCGAATCACAGTTCAACCAAGTCCTAAACATCGAACTGGATCAAATAATTGAGGCCTGTAAGCACCTTGATGAGAAGTGGTCTCCCAAGTTCATGGTGATTGTCGCGCAGAAAAACCACCACACAAAATTCTTCCAGACTGGATCTCCTGATAATGTTCCGCCTGGGACGGTTATTGACAACAAAGTTTGTCATCCGCGAAATAATGACTTCTACATGTGTTCGCATGCTGGGATGATTGGGACGACGAGACCTACTCATTACCATGTTCTGTTAGATGAGATTGGGTTTTCAGCTGATGATCTCCAGGAACTTGTGCATTCACTGTCATATGTGTACCAACGGAGCACTACTGCCATTTCCATAGTTGCTCCGATATGCTACGCCCACCTGGCAGCCACGCAAATGTCACAATTTATGAAGTTTGATGACATGTCGGAAACTTCTTCATCCCATGGTGGGCTAACATCGGCTGGGAGTGTCCCAGTTCCTCAACTGCCAAGATTGCATGAAAAAGTGAGCAGTTCAATGTTTTTTTGTTAA 2760 0.4493 MESSEPEEIEAPEGLPPPPPIPPNVVPLRAESVNIPEQTPKVSRPKRGPMARSGHGRKGQTIQLLTNHFKVGVRNVDGYFFHYSVSLFYEDGRPVDGKSIGRRVIERVHDTYDTELEGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDMSSNRTAGNGSPGGSGSPNESERKRLRRPYQSKTFQVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNIPRNFTDLGGGVLGCRGFHSSFRAVQGGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPFEIDWAKAKRMLKNLRIKASPSNMEYKITGLSDLPCNEQVFSLKQKNGRDTNGDGEVQTIEVTVYDYFVNYRHIELRFSAGLPCINVGKPKRPTYFPLELCSLVSLQRYTKALTTRQRSSLVEKSRQKPQERMTVLSDALKSNDYDADPMLRACGISINTHFTQVEGRVLQAPKLKLGNGEDCFPRNGRWNFLNKKMVEPTKIERWAIVNFSSRCDTRKLSGDVIRCGKERGILIDTPFDVFDENPRSRQAPPHVRVEQMFEQIKSKLPGAPQFLLCLLPEKGSNIYGPWKRKNLAEFGIVNQCIAPTRADDRYLTNVLLKINAKLGGLNTLLAVEHSPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRHWPLISRYRASVRTQSPKVEMIDSLYKRVSDTEDEGILRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKHLDEKWSPKFMVIVAQKNHHTKFFQTGSPDNVPPGTVIDNKVCHPRNNDFYMCSHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISIVAPICYAHLAATQMSQFMKFDDMSETSSSHGGLTSAGSVPVPQLPRLHEKVSSSMFFC* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00104 919 CDD PAZ_argonaute_like 283 403 - -
Eupl01g00104 919 SMART Piwi_a_2 573 880 IPR003165 GO:0003676
Eupl01g00104 919 Pfam Argonaute linker 2 domain 430 475 IPR032472 -
Eupl01g00104 919 Gene3D - 468 633 - -
Eupl01g00104 919 ProSiteProfiles Piwi domain profile. 573 880 IPR003165 GO:0003676
Eupl01g00104 919 FunFam Protein argonaute 3 640 919 - -
Eupl01g00104 919 SMART DUF1785_2 231 283 IPR014811 -
Eupl01g00104 919 Gene3D - 639 919 IPR036397 GO:0003676
Eupl01g00104 919 MobiDBLite consensus disorder prediction 11 26 - -
Eupl01g00104 919 SUPERFAMILY PAZ domain 278 444 IPR036085 GO:0005515
Eupl01g00104 919 CDD Piwi_ago-like 448 874 IPR045246 -
Eupl01g00104 919 MobiDBLite consensus disorder prediction 151 176 - -
Eupl01g00104 919 Pfam PAZ domain 287 420 IPR003100 GO:0005515
Eupl01g00104 919 ProSiteProfiles PAZ domain profile. 325 404 IPR003100 GO:0005515
Eupl01g00104 919 MobiDBLite consensus disorder prediction 151 166 - -
Eupl01g00104 919 FunFam Protein argonaute 7 278 408 - -
Eupl01g00104 919 SUPERFAMILY Ribonuclease H-like 557 878 IPR012337 -
Eupl01g00104 919 Pfam Piwi domain 574 880 IPR003165 GO:0003676
Eupl01g00104 919 Gene3D paz domain 277 408 - -
Eupl01g00104 919 Pfam N-terminal domain of argonaute 60 221 IPR032474 -
Eupl01g00104 919 Pfam Argonaute linker 1 domain 233 281 IPR014811 -
Eupl01g00104 919 MobiDBLite consensus disorder prediction 1 57 - -
Eupl01g00104 919 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 45 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00104 Eupl-Chr1 3412572 3467264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00104 3 919 Eukaryotic Initiation Factors Gene Family AT1G48410 35.015 3.49e-166 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00104 K11593 - aew:130770747 1520.37