Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00090 ATGAAGAGGTCTTTGTCGTCTTCAGCTTCCTCTACTGCTCAGCCTTCTCCTCAACAGCCAGCTAAAACCAGAACCAAACGTACGAGAAGAAACCTCAATCCAGAGAAACTCCAGTTTGATAACAGTACAGGCAAGAGACGCTCAATTTACAGAGGAGTCACGAGGCATAGATGGACAGGGAGGTATGAAGCTCACCTCTGGGATAAGAACTCGTGGAATCCCATTCAGAACAAGAGAGGACGACAAGTTTATTTGGGAGCGTACGATGATGAGGAAGTTGCTGCTCATACGTATGATCTTGCTGCTCTCAAATACTGGGGCCCAGATACCATATTGAATTTTCCGTTAGCTACATATACAAAGGAGTATGAAGAAATGCATAGTGTGTCTAAGGAAGAATATTTAGTTTTGCTCAGGCGGCGGAGTAGTGGGTTTTCTAGAGGAGTTTCTAAGTATCGTGGGGTGGCCAGGCACCATCATAACGGGCGGTGGGAGGCAAGAATAGGCCGTGTTTTGGGGAATAAATATCTCTACTTGGGAACTTATAGTACCCAAGAAGAAGCAGCTGTAGCTTACGACGTTGCGGCCATAGAGTACAGAGGCTTGAACGCAGTGACGAATTTCGACATTAACAATTACATAAGATACACAGAACCACCACCATTATCACACCAGTCCTCCCTTTTTACTGAATCACAAGAGGCGGGCCCATTTCAGGTTCCCACACCAGAACTCTCCGATTCTGTCGATCAGTCCACAGTCATGGACCCCATTAAAGAACATCCGTGGAGCCTCCGCATGGACCCTGGTCTCGACCCGCTGCCAGTTCTCGATATTGCCCTCGATACATCGAGCGAATTACCGGATTTGTTTATCGACATGGGCTTTGAAGAGAACATAGAACTTCTATTTGAGGGGACTACTAGTAAGGGATTAGGGTTCCAAGAGTAA 951 0.4658 MKRSLSSSASSTAQPSPQQPAKTRTKRTRRNLNPEKLQFDNSTGKRRSIYRGVTRHRWTGRYEAHLWDKNSWNPIQNKRGRQVYLGAYDDEEVAAHTYDLAALKYWGPDTILNFPLATYTKEYEEMHSVSKEEYLVLLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAAVAYDVAAIEYRGLNAVTNFDINNYIRYTEPPPLSHQSSLFTESQEAGPFQVPTPELSDSVDQSTVMDPIKEHPWSLRMDPGLDPLPVLDIALDTSSELPDLFIDMGFEENIELLFEGTTSKGLGFQE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00090 316 FunFam AP2-like ethylene-responsive transcription factor 48 117 - -
Eupl01g00090 316 SMART rav1_2 49 121 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 SMART rav1_2 151 215 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 MobiDBLite consensus disorder prediction 1 22 - -
Eupl01g00090 316 FunFam AP2-like ethylene-responsive transcription factor 150 211 - -
Eupl01g00090 316 CDD AP2 150 211 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 MobiDBLite consensus disorder prediction 1 46 - -
Eupl01g00090 316 CDD AP2 48 115 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 ProSiteProfiles AP2/ERF domain profile. 151 209 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 Pfam AP2 domain 49 107 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 Pfam AP2 domain 150 201 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 Gene3D AP2/ERF domain 150 211 IPR036955 GO:0003700|GO:0006355
Eupl01g00090 316 Gene3D AP2/ERF domain 49 117 IPR036955 GO:0003700|GO:0006355
Eupl01g00090 316 SUPERFAMILY DNA-binding domain 150 211 IPR016177 GO:0003677
Eupl01g00090 316 ProSiteProfiles AP2/ERF domain profile. 49 115 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 PRINTS Ethylene responsive element binding protein signature 191 211 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Eupl01g00090 316 SUPERFAMILY DNA-binding domain 48 116 IPR016177 GO:0003677
Eupl01g00090 316 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 11 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00090 Eupl-Chr1 2917153 2920277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00090 139 218 AP2-EREBP Transcription Factor Family AT1G72570 36.364 2.00e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Eupl01g00090 AP2 3.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00090 - - msin:131227862 420.239