Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00086 ATGCAAAATGCGATTAAGATACAAAGGGAAATCTTTAGACAAGGAAGTGCAGCTATAACTAAAACTTGTTCTATAAGAAGTGGGAGAAAATTCAGGTGGCTGAAACTGGAAGACACAGCGAACAAGAAGCTATTGGGGTATGCTTTGTGGGAGCAAGGTGCAAAGATAAAACCTTTCATTTGTGCTTGCTTAGCAAAAGAACCCAACAAGGTTCCGATTGTTGGGGCATGTGGGAAGCCATGGCTTGGGACGGTCCAAGGGAATGCCTTCGGGGTTGCATTTAGAGCTGTAGCTGAGGAGATTGGAGCTGAGTTCTTCCAGGAGTTGTTCGAGTCTTCGTGGATAGTTTTGGATGTCGTTGCTGTTAATTCTTTCATGATACGGATAACTGAGAAGCTTTGA 402 0.4378 MQNAIKIQREIFRQGSAAITKTCSIRSGRKFRWLKLEDTANKKLLGYALWEQGAKIKPFICACLAKEPNKVPIVGACGKPWLGTVQGNAFGVAFRAVAEEIGAEFFQELFESSWIVLDVVAVNSFMIRITEKL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00086 133 PANTHER CDC45-RELATED PROTEIN 1 132 IPR003874 GO:0006270
Eupl01g00086 133 Pfam CDC45-like protein 1 132 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00086 Eupl-Chr1 2818710 2819111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00086 1 133 Core DNA Replication Machinery Family AT3G25100 60.959 2.04e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00086 K06628 - nnu:104593609 207.223