Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00081 ATGGAAATGGGTGTTGGAAACAGAAAAGTAAGTCATCTGCTTTCATTTATATTGATCTTTTATTCGTTTGCACCACCAACTTGCACCGCTACAGACACCATAACTCCAACCCAATCGATCACAGATGGAGAAACTCTAAGCTCCAACGGTGAAATATTCGAATTAGGCTTCTTTAGTCCCAGAAATTCAAATAACCGCTATGTTGGGTTATGGTACAAGAAAATATTTGATCGAAAATTTCTATGGGTCGCAAACAGAGAGAACCCGCTAAAGGATTCCTCCGGAGTTTTATCGATAGGTAGGGATGGAAATCTTGTGATTCTGGATGGTAGAGGAAACACTGTCTGGTCGACAAATGTTTCTGTTGTGTCCAATAGTTCCATAGCAGTGCTCATGGATTCAGGAAATCTTGTTCTTATAAAAAGTTATTCAAAGGACAGCAAATACTTATGGCAAAGCTTCGATTACCCTTCAGATACTTTCATGCAGCACATGAGGCTGGGGTCGAACACTAAAGCTGGGGAAAAACTTCTTTTAACTTCGTGGAAAAGCGACGATGATCCGTCCCCGGGAAATTTCACTGTGGGGCTCGGTAGTCCAAAAATAGCACTAGCTCCACAAGCTTTTATATGGAATGGGTCGGTCACATATTGGAGAAGTGGGGAATGGAACGGTAGGCAATTTATTGGAGTGCCGACCATGGATTCCGCCTATTTTGACGGTTTCCAATATGACACAGATGATCAAGGAGGGGGATATTTCTCGTTTTCTATATTCAACGATTCCTACGTTTCAATTATGGTAATTAATAGTTCTTCGGGAACTCTGAAACAAATGAATTGGTACGCAGGGGATAAGCAATGGACCGATGTTTGGAACTCATCTGAGAGTCAATGCGATGTTTACAATACATGCGGGCCTTTTGGGAATTGTAACGAGTTGGAATCACCGATCTGTAGGTGTTTGAGAGGGTTCGAACCCAGATTTAGTGAGGAATGGAGAAAGGGAAATTGGAATGGTGGGTGTGTGAGAAGAACTCAACTTCAGTGTCAGAAAAACATGACAAGTTTAGATGAAGGTAAAGGAGATTTGTTTCTGAAATTGGGTGGGTTGAAATTGCCAGATTTTGATGATTATTTGAACGTTGGGGATGCGACGGAATGCAAAGAGACATGTGTGAAAAATTGCTCATGTGTGGCGTACGCTTATGTTAGCGGAATCGGGTGTATGGTGTGGGGCAGAGAGCTAATCGATGTTCGGCAGTTCCCTTCGGGTGGGGAAGAGCTTTTCCTCCGTCTTGCTTCAGACCTTGGTAAAAAGAAACAAATCAAGACATATATCATTGTACTCATACCCATCACTGGATCAATTACCTTAATTGCCTTAGCATGCATTTTGTGTAGGTTGAGGGCGAAACGAAGAGGGGAAAAGAAAGAGTTGCTTGAGATGATTGATTCAGGAAAAAGTATGGAGAATTGTAGAGAATCTCCATATGCAAATTTGTTGAAAGATGTTGCAACGGGAAGAGAAAGCCCAGAACCACCGTTGTTCGACTTTGGTACTATAGCAGTCGCTACAAACAACTTTACAGATAAGCTTGGGGAAGGGGGATTTGGTCCTGTTTATAAGGGTAAACTACTAGATGGTCAAGAAATTGCAGTGAAAAGACTATCGAGAAGCTCTGGGCAGGGCATAGAAGAGTTCAAGAATGAAGTTAAGTTGATATCCAAACTTCAACACAGGAACCTTGTTAGGCTCCTGGGTTGCTGCATTGAAGGGGAAGAGAAGATGCTACTCTATGAGTACATGCCTCACAAAAGTCTAGATGCCTTTCTCTTTGATCCAACCAGACGAATGATGCTAGATTGGAAGAAACGCTTCAACATTGTTGATGGGATCGCTCGAGGGCTTCTTTATCTTCATCGTGATTCTCGACTAAAGGTAATTCATCGAGATTTGAAGGCCAGCAACATTCTTTTAGATGAGGATATGAACCCCAAAATTTCAGACTTTGGCATGGCAAGGATATTTGGTGGGAATCAAACGCTAGCAAATACCAATAGGGTTGTTGGAACATATGGCTATATGTCCCCAGAGTATGCCATGGAAGGGATATTTTCTGAGAAATCCGATGTCTTCAGCTTTGGAGTCTTGTTATTAGAGACTGTTAGCAGTAAGAGGAACACAAGCTTTTATCACCATGAGCAATCTTTAAACCTATTGGGATATGCGTGGCAATTGTGGAATGAAGGCAAGGCATTGGAGTTAATAGATCCAACATTGGTCAACTCGTATTCTCCATTAGAATTGATGAGATGCATCCATGTGGGGCTCCTATGCGTGCAGGAACATGCAGTCGATAGACCAATCATGTCTACTGTAATTTTCATGCTTGGCAGTGAAATAGCTCTTCCTACTCCAAAGCAACCTGCATTTATTCTAGAGAAAAGATATGTGGAGTCTGGTATAATCTCTATAAATTCTGTTACAGTAACGTCCGTAGAAGGACGTTAA 2514 0.4185 MEMGVGNRKVSHLLSFILIFYSFAPPTCTATDTITPTQSITDGETLSSNGEIFELGFFSPRNSNNRYVGLWYKKIFDRKFLWVANRENPLKDSSGVLSIGRDGNLVILDGRGNTVWSTNVSVVSNSSIAVLMDSGNLVLIKSYSKDSKYLWQSFDYPSDTFMQHMRLGSNTKAGEKLLLTSWKSDDDPSPGNFTVGLGSPKIALAPQAFIWNGSVTYWRSGEWNGRQFIGVPTMDSAYFDGFQYDTDDQGGGYFSFSIFNDSYVSIMVINSSSGTLKQMNWYAGDKQWTDVWNSSESQCDVYNTCGPFGNCNELESPICRCLRGFEPRFSEEWRKGNWNGGCVRRTQLQCQKNMTSLDEGKGDLFLKLGGLKLPDFDDYLNVGDATECKETCVKNCSCVAYAYVSGIGCMVWGRELIDVRQFPSGGEELFLRLASDLGKKKQIKTYIIVLIPITGSITLIALACILCRLRAKRRGEKKELLEMIDSGKSMENCRESPYANLLKDVATGRESPEPPLFDFGTIAVATNNFTDKLGEGGFGPVYKGKLLDGQEIAVKRLSRSSGQGIEEFKNEVKLISKLQHRNLVRLLGCCIEGEEKMLLYEYMPHKSLDAFLFDPTRRMMLDWKKRFNIVDGIARGLLYLHRDSRLKVIHRDLKASNILLDEDMNPKISDFGMARIFGGNQTLANTNRVVGTYGYMSPEYAMEGIFSEKSDVFSFGVLLLETVSSKRNTSFYHHEQSLNLLGYAWQLWNEGKALELIDPTLVNSYSPLELMRCIHVGLLCVQEHAVDRPIMSTVIFMLGSEIALPTPKQPAFILEKRYVESGIISINSVTVTSVEGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00081 837 CDD PAN_AP_plant 346 434 - -
Eupl01g00081 837 ProSiteProfiles Bulb-type lectin domain profile. 31 152 IPR001480 -
Eupl01g00081 837 Gene3D Transferase(Phosphotransferase) domain 1 603 804 - -
Eupl01g00081 837 CDD B_lectin 37 157 IPR001480 -
Eupl01g00081 837 Gene3D Phosphorylase Kinase; domain 1 505 602 - -
Eupl01g00081 837 SMART serkin_6 527 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00081 837 Pfam D-mannose binding lectin 81 183 IPR001480 -
Eupl01g00081 837 SMART ntp_6 360 433 IPR003609 -
Eupl01g00081 837 Gene3D - 27 154 IPR036426 -
Eupl01g00081 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 154 - -
Eupl01g00081 837 Pfam PAN-like domain 361 419 IPR003609 -
Eupl01g00081 837 Pfam S-locus glycoprotein domain 218 328 IPR000858 GO:0048544
Eupl01g00081 837 ProSiteProfiles Protein kinase domain profile. 527 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00081 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 188 IPR036426 -
Eupl01g00081 837 SUPERFAMILY Protein kinase-like (PK-like) 510 798 IPR011009 -
Eupl01g00081 837 CDD STKc_IRAK 533 798 - -
Eupl01g00081 837 Pfam Protein tyrosine and serine/threonine kinase 529 728 IPR001245 GO:0004672|GO:0006468
Eupl01g00081 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Eupl01g00081 837 ProSiteProfiles EGF-like domain profile. 295 331 IPR000742 -
Eupl01g00081 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 602 - -
Eupl01g00081 837 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 789 - -
Eupl01g00081 837 SMART blect_4 37 157 IPR001480 -
Eupl01g00081 837 ProSiteProfiles PAN/Apple domain profile. 350 434 IPR003609 -
Eupl01g00081 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Eupl01g00081 837 PIRSF SRK 7 837 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00081 Eupl-Chr1 2744483 2751255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00081 517 836 Receptor kinase-like Gene Family AT4G11530 60.185 3.17e-131 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl01g00081 PK_Tyr_Ser-Thr 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00081 - - msin:131221805 940.258