Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00079 ATGGAGTTCTTAGGGAATCCCAAAATCGAGGTATTGGGTATCGCCGTAGCACTCGTCGCCATCACCGCCGGTGCCGCTTATTTCTATCTCGCCAAGAAACCCAAAGGTTGCATAGACCCTGAGAACTTCAAGGAGTTCAAACTCGTTAAGCGCACTCAACTCAGCCACAATGTAGCTGAGTTTCGATTTGGTCTTCCCACACCTACCTCTGTGTTGGGTCTTCCTATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCTTGGTGAAGACGTTATCAAACCTTATACCCCAACTACTTTGGATTCAGATGTTGGATACTTTGAACTAGTTATAAAGATGTATCCACAAGGAAGGATGTCTCACCATTTCCGAGAGATGTGTGTAGGTGATTACCTGGCTGTTAAGGGCCCTAAGGGGCGTTTCAAGTATCAACCTGGCCAAGTTAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACTCCAATGTTCCAAGTTGCTAGAGCAATATTGGAAAACCCAAAGGACAATACCAAGGTACATCTTATTTATGCCAACGTCACATTTGAGGACATTCTTTTGAAGGAAGACCTAGATAGCCTTGCTAATAACTACCCTAGCCGCTTCAAAGTCTACTATGTTTTGAATCAGCCTCCTGAAGTATGGAATGGCGGTGTCGGGTTTGTATCCAAGGAAATGATTCAAACACACTGCCCAGCACCAGCACCTGATATCCGGATTTTGAGGTGCGGCCCACCACCCATGAACAAGGCCATGGCTGCTCACCTTGATAACCTTGGATACACGTCAGAGATGCAGTTCCAGTTCTGA 834 0.4628 MEFLGNPKIEVLGIAVALVAITAGAAYFYLAKKPKGCIDPENFKEFKLVKRTQLSHNVAEFRFGLPTPTSVLGLPIGQHISCRGKDSLGEDVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMCVGDYLAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMFQVARAILENPKDNTKVHLIYANVTFEDILLKEDLDSLANNYPSRFKVYYVLNQPPEVWNGGVGFVSKEMIQTHCPAPAPDIRILRCGPPPMNKAMAAHLDNLGYTSEMQFQF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00079 277 Gene3D - 136 277 IPR039261 -
Eupl01g00079 277 Gene3D Translation factors 34 135 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 153 172 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 94 101 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 247 255 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 130 144 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 191 202 - -
Eupl01g00079 277 PRINTS Cytochrome B5 reductase signature 72 83 - -
Eupl01g00079 277 Pfam Oxidoreductase NAD-binding domain 154 260 IPR001433 GO:0016491
Eupl01g00079 277 FunFam NADH-cytochrome b5 reductase 36 135 - -
Eupl01g00079 277 PANTHER NADH-CYTOCHROME B5 REDUCTASE 33 277 IPR001834 GO:0016491
Eupl01g00079 277 CDD cyt_b5_reduct_like 46 277 - -
Eupl01g00079 277 SUPERFAMILY Riboflavin synthase domain-like 35 146 IPR017938 -
Eupl01g00079 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 247 255 IPR001709 GO:0016491
Eupl01g00079 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 153 172 IPR001709 GO:0016491
Eupl01g00079 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 191 202 IPR001709 GO:0016491
Eupl01g00079 277 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 41 145 IPR017927 GO:0016491
Eupl01g00079 277 FunFam NADH-cytochrome b5 reductase 135 277 - -
Eupl01g00079 277 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 133 272 IPR039261 -
Eupl01g00079 277 Pfam Oxidoreductase FAD-binding domain 46 144 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00079 Eupl-Chr1 2709547 2717405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00079 31 277 NADPH P450 reductases AT5G17770 85.020 4.00e-160 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00079 K00326 - atr:18425181 493.812