Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00075 ATGATGGATAGCCATCGATTTTCTCCTCTTCTTCTGTTGGGTCTCTTCTGTCTGTTTTCGATTGCTGGATCAGCTTCTTCTGCTCTCTCCAAAGACTCACTTGGAATCCCTCCTGAAGACACGAAGTACTTCAAGTCCGAGATTATTAAGTGCAAGGATGGATCAAAGAAATTCACCAAAGCTCAGCTCAACGATGATTTCTGCGATTGCCCAGATGGAACTGATGAACCAGGAACATCAGCCTGCCCAGGAGGAAAATTTTTCTGTCAAAATGCAGGGCATGCTGCTCTTTTATTGTTCTCTTCAAGAGTGAACGATGGCATTTGTGACTGCTGCGATGGGAGTGATGAGTACGATGGTAAAGTGAAGTGTCTAAATACATGCTGGGATGCTGGCAAGGTAGCCGGAGACAAATTGAAGAAAAAGATTGCAACATACCAAGAGGGGGTCACTATACGGAAGCAGGAAGTAGAAAAAGCAAAACAAGCAATAGCAAAAGATGAAGCAGAATTATTGAAGCTGAAAAATGAGGAGAAGATACTCAAAGGGCTTGTTCAACAACTCAAAGAACACAAGGAACATATTGAAAAGGTAGAGGAGAAAGAACGGTTAGAGAACGAAAAGGAAGAGAAGAGGAAAAGGGAATCCAAGGAGCAAGAAAAGCATTCCACAGAGAGTCAACATGATGAAAAACATGAAACCATTGGGGCTTTAGACGAATCATCATTGGAACAGGATGTGGCAGAAGACAACAATGACCCTGCAGTTGAATCGGAAAACAGTGATAATGCTGGAAATGAAGTATATCCCAGTCATGGAGTAGAACAGCATGCATCTGATGACACGGATTACACCATGGTCGAAGCTGAAACTGGTCTTGATGCTGGAAGCACGGTGTCTCCCGACCAAATCATGTACGTAAAGATGCAAATGCGTTTTGAACGCAAGACCTGTCACCTAGCAAGACAAGCCCCTAACTTAAACAACTTAAGCAGGTACTGGGAGAAATTCGAGAACTCGTACAGGTTCATGCTATTTTCAAATGGTGATGGATGCTGGAATGGCCCTAATAGAAGTTTAAAGGTGAAGCTTAGGTGTGGTTTGAAAAATGAGCTCACTGATGTTGATGAACCAAGCCGCTGCGAATATATAGCATTGTTGTCAACCCCAGCTCTGTGCCTAGAAGAAAATCTAAAGGCACTACAGCAAAAACTAGAAGTAATGAACACGGAACAACCCCAGAGCCACGATGAGCTTTAA 1260 0.431 MMDSHRFSPLLLLGLFCLFSIAGSASSALSKDSLGIPPEDTKYFKSEIIKCKDGSKKFTKAQLNDDFCDCPDGTDEPGTSACPGGKFFCQNAGHAALLLFSSRVNDGICDCCDGSDEYDGKVKCLNTCWDAGKVAGDKLKKKIATYQEGVTIRKQEVEKAKQAIAKDEAELLKLKNEEKILKGLVQQLKEHKEHIEKVEEKERLENEKEEKRKRESKEQEKHSTESQHDEKHETIGALDESSLEQDVAEDNNDPAVESENSDNAGNEVYPSHGVEQHASDDTDYTMVEAETGLDAGSTVSPDQIMYVKMQMRFERKTCHLARQAPNLNNLSRYWEKFENSYRFMLFSNGDGCWNGPNRSLKVKLRCGLKNELTDVDEPSRCEYIALLSTPALCLEENLKALQQKLEVMNTEQPQSHDEL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00075 419 SUPERFAMILY Mannose 6-phosphate receptor domain 335 393 IPR009011 -
Eupl01g00075 419 Coils Coil 157 227 - -
Eupl01g00075 419 MobiDBLite consensus disorder prediction 199 239 - -
Eupl01g00075 419 Coils Coil 391 411 - -
Eupl01g00075 419 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 419 IPR039794 -
Eupl01g00075 419 ProSiteProfiles MRH domain profile. 273 395 IPR044865 -
Eupl01g00075 419 Pfam Glucosidase II beta subunit-like 49 168 IPR028146 -
Eupl01g00075 419 Gene3D - 301 393 IPR009011 -
Eupl01g00075 419 MobiDBLite consensus disorder prediction 199 279 - -
Eupl01g00075 419 Pfam Glucosidase II beta subunit-like protein 343 409 IPR036607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00075 Eupl-Chr1 2558908 2595061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00075 334 419 Calmodulin-binding Proteins AT5G56360 75.862 6.22e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00075 K08288 - msin:131251163 334.339