Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00073 ATGGATGCAAGCATGTGCAGCCCAAAAACCGTGCGAGCGAGTGAGATGGGTGCCAAGGGGAAGACAACCACGATGAAGAAGAAACAAAAGAAGGCTTCTTCTCAGTTATCGATTTCCACTCGTAAAAACGAAGCCGATTTCTTGCCGTTAGAAGGTGGGCCTGGCCGAAAACTTCCCGGTCGAGAAGAACCCATTGAAAACACTGCCACAGTCTTATACATCGGTCGGATACCCCATGGGTTTTATGAGACTGAAATGGAAGGTTTCTTTAAACAGTTTGGTACAATCAAGCGATTAAGGATCGCACGAAACAAGAAGACAGCAAAGTCTAAGCATTTTGGCTTCATCGAATTTGAGTCTCCAGAGGTGGCAAAAATTGTAGCTGAGTCTATGCATAACTATCTTCTATTTGAGCACATGTTGCAAGTCCATCTTATTCCTTCAGAGCGTGTCCACCCGAAGTTATGGAATGGTGTAAACCGTAGATACAAGCCAGCAGACTGGACTCAAATTGAGCGAAAGCGGCATAACAAGGAAAGGACATTGGAAGAACACAAGAAGTTGGTGGGAGGAATCCTGAAACGAGATGAGAAGCGGCGGAAGAGAATAGAGGCTGCTGGTATTGATTACGTGTGCCCAGAAATCGTGGGTAGCCATCAGCCTGCTCCAAAGAAGATCAGGTTTGATGAAGATTAG 696 0.4569 MDASMCSPKTVRASEMGAKGKTTTMKKKQKKASSQLSISTRKNEADFLPLEGGPGRKLPGREEPIENTATVLYIGRIPHGFYETEMEGFFKQFGTIKRLRIARNKKTAKSKHFGFIEFESPEVAKIVAESMHNYLLFEHMLQVHLIPSERVHPKLWNGVNRRYKPADWTQIERKRHNKERTLEEHKKLVGGILKRDEKRRKRIEAAGIDYVCPEIVGSHQPAPKKIRFDED* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00073 231 SMART rrm1_1 71 144 IPR000504 GO:0003723
Eupl01g00073 231 SUPERFAMILY RNA-binding domain, RBD 62 159 IPR035979 GO:0003676
Eupl01g00073 231 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 138 IPR000504 GO:0003723
Eupl01g00073 231 Gene3D - 10 145 IPR012677 -
Eupl01g00073 231 MobiDBLite consensus disorder prediction 1 43 - -
Eupl01g00073 231 CDD RRM_NIFK_like 71 144 - -
Eupl01g00073 231 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 148 IPR000504 GO:0003723
Eupl01g00073 231 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 18 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00073 70 143 Eukaryotic Initiation Factors Gene Family AT1G71770 29.730 3.53e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00073 K14838 - aew:130760358 340.502