Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00070 ATGCCTACCTTATCAGATCTATTGTCGAACGCATTCATCTCACGGAACAACTCCAATTTGAATAATATATCTTCTAGGATGGATCAAGATCGAAATCGACCTACCCCAGTTGAGAATTACCGGAATTCCTCTTCTCGCCGAAGTGTTTCGTCTTTGCAATCCAAAGACTCTGGGAAAAATTCAATTGATGAGGGGAATTCGGCAACATTCTCTGTTGAGGTCTTTGGCCATTTGGGGTCTAAGCGGCCGATACGGTATGGGTCGAGGGGCACTGATTCTGAGGGATTCAGTGCTTCCCAGAAAGAGATTAGTGATGAGGATGCGAGGCTTATCTATGTTAATGATCCCAAGAAGACAGATGAGAGATTCGAATTCGCGGGCAACTCAATTCGAACTGGGAAGTACTCGGTCCTAACTTTCTTGCCACGCAATCTATTTGAGCAATTCCATCGAGTCGCATACGTATATTTCCTTGTGATTGCCATCTTAAACCAGCTCCCCCAGCTCGCTGTGTTCGGGAGGGGGGCTTCTATAATGCCGTTGGCTATTGTCCTGCTTATTACGGCAGTTAAGGATGCTTATGAGGACTGGAGGCGGCATCGATCAGACCGAATTGAGAACAGTCGGGTGGCTTCGGTGCTGGTAAATGGTCAGTTTCAGCCAAAGAGATGGAAGGACATCCGGGTTGGGGAAATCCTCAAGGTTTCTGTAAACGACACTCTCCCTTGTGACATGGTATTGCTCTCCACCAGCGACCCCACAGGGGTTGCTTATGTCCAGACCATTAATTTAGATGGAGAATCAAACTTGAAGACCCGGTATGCAAAGCAGGAAACCCTTTCGAAGATGCCCGAGAAAGAGGGGATTGAAGGGCTAATCAAGTGTGAGCGACCCAATCGGAACATATACGGCTTTCAAGCAAACATGGAGATTGATGGGAAGCGGGTCTCGCTTGGACCCTCGAACATTATCCTCCGTGGTTGTGAGCTCAAGAACACAGCCTGGGCGGTTGGGGTGGCAGTTTATGCTGGCCGTGAGACCAAGGCGATGCTCAACAACTCTGGAGCCCCATCTAAGAGGAGCCGATTGGAGACCCGTATGAACCGGGAGATCATACTACTGTCACTATTTCTCATTGCTTTGTGTGCTGTAGTCTCTACCTTTGCTGGGGTTTGGCTGAAGCGCCACCAGGATGAGCTGGACTTCCTGCCTTATTACCGGAAGAAGAACTTCTCTGAGGGTGACGAAGAGAATTACAACTATTACGGATTGGGGTTGGAGATATTCTTCACGTTCCTCATGTCGGTGATCGTGTTCCAGATCATGATCCCTATCTCACTCTACATTTCAATGGAGCTGGTCCGCCTTGGACAGGCCTATTTCATGATCCGAGACACGAGGTTGTATGATGAATCATCGAATTCAAGGTTTCAGTGCAGGGCTTTGAACATAAATGAGGATCTTGGACAGATAAAATACGTCTTCTCGGATAAAACTGGAACACTGACTGAGAACAAGATGGAATTTCAGTGTGCAAGCATATGCGGAGTAGATTACAGTGGTGGGAAAGCTCCCCCCCAAGGAGAGCAAGACGGTTACTCTGCCCGAGTGGATAGAAAGGTTTGGAAGCCCAAGATGAATGTAAAGGTTGACCCGAAGCTCCAAAGACTACTGAGAAGTGGCAAGGAAACAGCGGAGGGAAAGCATGCTCACGATTTTTTTCTTGCTCTGGCTGCTTGCAATACTATCGTGCCTCTAGTTGTGGAGACATCAGACTCTGCTCTGAGGTTGGTAGATTATCAGGGCGAATCTCCTGACGAACAGGCACTGGTTTATGCTGCGGCCACCTATGGGTTCATGCTTATAGAACGAACTTCCGGGCACATAATCATTGATGTCCAAGGAGAAAGACAGAGATTTGATGTTTTGGGTATGCACGAGTTTGATAGTGACCGCAAGAGGATGTCGGTTATAGTTGGCTGCCCTGACAAGACTGTGAAAATCTTTGTGAAAGGTGCTGACACTTCAATGTTTAGTGTGATTGATAGATCCCTAAACTCAGATGTAATCCGCGCAACTGAAACCCATCTCCACACCTACTCCTCATTGGGTCTAAGAACGTTGGTTGTTGGGATGCGGGAACTGAGTGGTTCAGAGTTTGAGCAATGGCAGTCCGCCTATGAGAAAGCAAGCACTGCATTGATAGGAAGGGTGAGCTCACTCCGTGCTGTTGCAGTTAATGTGGAAAACAATCTTAACATATTGGGAGCCTCCGGCATTGAAGATAAGCTGCAGCAAGGTGTGCCTGAAGCCATAGAGTCTCTGAGGCAAGCTGGGATTAAAGTGTGGGTCTTGACAGGGGACAAGCAAGAAACCGCCATCTCGATTGGCTACTCTTGTAAACTCCTAACTGGTGAAATGACTCAGATTATAATAAATAGCAATTCTAAGGAATCTTGTAGAAAGAGCCTAGAAGAAGCAAAGGCCATGTCTAAAAAGGTTGTGGCAATGTCTGGGCATACACAAAACACTGGAGGAGGTGTGGGACCTGGTAGAATTCCTCTTGCTTTGATCATTGATGGTACCAGCCTTGTCTATATTCTTGAAACCGAATTAGAAGAACAGCTTTTCCAAATAGCTACAGAATGTAGTGTGGTTCTGTGTTGCCGAGTAGCTCCATTGCAAAAAGCTGGAATTGTTGCCCTCATAAAGAACAGGACGGATGACATGACCCTTGCCATCGGAGATGGTGCCAATGATGTTTCGATGATCCAAATGGCTGATGTGGGAATTGGCATCAGTGGCCAAGAGGGGAGGCAAGCCGTCATGGCATCAGATTTTGCGATGGGGCAGTTCAGATTCTTGGTTCCCCTTTTATTGGTCCATGGTCACTGGAATTACCAGCGTATGGGTTACATGATATTATACAACTTTTATAGAAATGCTGTGTTTGTCCTCGTTCTATTCTGGTATGTGCTTTACACTTCCTTCACTTTGACAACTGCGATCACAGAATGGAGTAGTGTGCTATATTCTGTGATCTATACTTCCTTGCCAACGATCGTTGTTGGGATACTTGACAAAGATTTGAGTAGGACGACTCTGCTGAAGTATCCTCAGCTTTATGGAGCTGGGCACAGACAAGAGAGCTACAACCTTAAATTGTTTTCGCTGACAATGACGGATACTTTTTGGCAAAGCATGGTTGTCTTCTTTGTCCCTTTCTTTGCATATAGGCACAGTACCGTGGACAGGTCTAGCATAGGAGATTTGTGGACCCTTGCGGTGGTGATCCTGGTTAATATTCACTTGGCCATGGACGTAATACGGTGGACATGGATTACACATGCATCCATATGGGGATCTATACTTGCGACATGCATTTGTATTGTTGTCATCGATGCTCTACCTGAATTACCCGGTTATTGGGCCATCTTCCATATTGCGAATACTGGATTGTTTTGGTTGTGCTTACTCGCCATACTAATAGCGGCAGTGGTTCCACGTTTTGTTGTAAAGGTTTTTAAACAATACTTGAGTGCTTGCGACATTCAGATTGCAAGAGAAGCTGAGAAGTTTGGGAATCTGAGGGATTTTGCGGGAGTAGAAATAGAAATGAACCCAGTCTTGGATCCTCCACGGGAGATGATAAGGTGA 3657 0.4632 MPTLSDLLSNAFISRNNSNLNNISSRMDQDRNRPTPVENYRNSSSRRSVSSLQSKDSGKNSIDEGNSATFSVEVFGHLGSKRPIRYGSRGTDSEGFSASQKEISDEDARLIYVNDPKKTDERFEFAGNSIRTGKYSVLTFLPRNLFEQFHRVAYVYFLVIAILNQLPQLAVFGRGASIMPLAIVLLITAVKDAYEDWRRHRSDRIENSRVASVLVNGQFQPKRWKDIRVGEILKVSVNDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKMPEKEGIEGLIKCERPNRNIYGFQANMEIDGKRVSLGPSNIILRGCELKNTAWAVGVAVYAGRETKAMLNNSGAPSKRSRLETRMNREIILLSLFLIALCAVVSTFAGVWLKRHQDELDFLPYYRKKNFSEGDEENYNYYGLGLEIFFTFLMSVIVFQIMIPISLYISMELVRLGQAYFMIRDTRLYDESSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASICGVDYSGGKAPPQGEQDGYSARVDRKVWKPKMNVKVDPKLQRLLRSGKETAEGKHAHDFFLALAACNTIVPLVVETSDSALRLVDYQGESPDEQALVYAAATYGFMLIERTSGHIIIDVQGERQRFDVLGMHEFDSDRKRMSVIVGCPDKTVKIFVKGADTSMFSVIDRSLNSDVIRATETHLHTYSSLGLRTLVVGMRELSGSEFEQWQSAYEKASTALIGRVSSLRAVAVNVENNLNILGASGIEDKLQQGVPEAIESLRQAGIKVWVLTGDKQETAISIGYSCKLLTGEMTQIIINSNSKESCRKSLEEAKAMSKKVVAMSGHTQNTGGGVGPGRIPLALIIDGTSLVYILETELEEQLFQIATECSVVLCCRVAPLQKAGIVALIKNRTDDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLYTSFTLTTAITEWSSVLYSVIYTSLPTIVVGILDKDLSRTTLLKYPQLYGAGHRQESYNLKLFSLTMTDTFWQSMVVFFVPFFAYRHSTVDRSSIGDLWTLAVVILVNIHLAMDVIRWTWITHASIWGSILATCICIVVIDALPELPGYWAIFHIANTGLFWLCLLAILIAAVVPRFVVKVFKQYLSACDIQIAREAEKFGNLRDFAGVEIEMNPVLDPPREMIR* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00070 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 942 1179 IPR032630 -
Eupl01g00070 1218 NCBIfam phospholipid-translocating P-type ATPase 125 1189 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl01g00070 1218 Gene3D - 752 954 IPR023214 -
Eupl01g00070 1218 SFLD p-type atpase 479 965 IPR044492 -
Eupl01g00070 1218 SUPERFAMILY HAD-like 482 955 IPR036412 -
Eupl01g00070 1218 PRINTS P-type cation-transporting ATPase superfamily signature 914 933 - -
Eupl01g00070 1218 PRINTS P-type cation-transporting ATPase superfamily signature 796 806 - -
Eupl01g00070 1218 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Eupl01g00070 1218 PRINTS Sodium/potassium-transporting ATPase signature 991 1011 - -
Eupl01g00070 1218 PRINTS Sodium/potassium-transporting ATPase signature 488 509 - -
Eupl01g00070 1218 Gene3D - 187 352 - -
Eupl01g00070 1218 MobiDBLite consensus disorder prediction 20 64 - -
Eupl01g00070 1218 FunFam Phospholipid-transporting ATPase 751 954 - -
Eupl01g00070 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 767 IPR023299 GO:0000166
Eupl01g00070 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 99 1192 - -
Eupl01g00070 1218 Gene3D - 592 738 IPR023299 GO:0000166
Eupl01g00070 1218 FunFam Phospholipid-transporting ATPase 599 732 - -
Eupl01g00070 1218 SFLD C1.7: P-type atpase like 479 965 - -
Eupl01g00070 1218 Pfam Cation transport ATPase (P-type) 603 678 - -
Eupl01g00070 1218 SUPERFAMILY Calcium ATPase, transduction domain A 208 349 IPR008250 -
Eupl01g00070 1218 CDD P-type_ATPase_APLT_Dnf-like 127 1074 - -
Eupl01g00070 1218 FunFam Phospholipid-transporting ATPase 183 352 - -
Eupl01g00070 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 125 1178 IPR023298 -
Eupl01g00070 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 497 503 IPR018303 -
Eupl01g00070 1218 NCBIfam HAD-IC family P-type ATPase 879 1000 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00070 1218 NCBIfam HAD-IC family P-type ATPase 427 516 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00070 1218 Pfam Phospholipid-translocating ATPase N-terminal 111 176 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00070 Eupl-Chr1 2373719 2380255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00070 32 1214 Primary Pumps ATPases AT5G04930 70.101 0.0 1725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00070 K14802 - nnu:104604173 1926.37