Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00068 ATGAGTTTACAACATTTGCAATCCTCCACTCTATGTCAGAAGAGTGATGGTGAAGGTTGTTTCAGAGGGTTTGCAGGGGTCAGCTTTCTTCCTCCTCCTCCACCTTCTTTCCCTCATAGTTTTGGGGTTCTGGGTTCTTCTAGAGAGAGTGTGTGTATGAGTGCTGAGATGGGCTTTCAGATTTTGAGCTCTTCAATGGAGCAGCAGAAGAAAGGTTGGAGCTTTCAGACCTCTGAGGAGAGGAGCATAAATGGGAGTGATGGTGGGAGTGAGGAGTATTTGGGGAATCAAAAGAATGGGATGGGAATGAACCAAGATGGTGAGGAGGAAGAAGAAGGTGAGAGCTTTGCAGGAGGGAAGGACCATGAGAGTGGACAGTCTAATAAGCTCTGTGCAAGAGGCCATTGGAGACCAGCTGAAGATGCCAAACTCAAAGAGCTTGTCTCTCAATATGGCCCTCAGAATTGGAACCTCATTGCTGAGAAGCTTGAAGGAAGATCAGGGAAAAGCTGCAGGTTAAGATGGTTTAACCAACTAGATCCAAGGATTAACAGGAGAGCTTTTAGTGAAGAAGAAGAGGATAGACTCTTGACTGCCCATAGATTGTATGGGAACAAATGGGCAATGATAGCTAGGTTGTTCCCTGGTAGGACTGATAATGCAGTCAAGAACCATTGGCATGTGATCATGGCTAGGAAACACAGGGAGCAATCCAGTGTTTATAGGAGGAGAAAGCCCTCCACTTCTCAGGCCCTCGATAAGAGGATGGAGATGACCACCCACCAAAACAATGCATGCAGTGAATCAACCATCACAAGCATCAGAGATGAATCTGCCTCAACCTGCACAGATCTCTCCCTCAATTCCTCTTCAAGCAGAGTTCTCCCTGTTTTGTTCACTAGGTTTAGTCCACACCAACACCACCAGCCCTATGAATTTCAAATGGGCTCATCTGAAGAAAAGATGGTTTCTTTGAGAAGTGGCTATTTACAGAAGTTGGATGGTTCTGGTAATGGCTTCTGTCATCCTGGGGCCATGATGATGGTTATGGGTGTGGATCAATCTGTTAATTCATATTCAAATTCTGAAATCTCAGCCACTGAGTCAGTGGCCAACAACAGGAAGAATCTCTATTTGGATGGGGAGATTGATAATGGGAGTGAGAAGATAAATATGCCCTTCATCGATTTCCTTGGAGTTGGAGCCACTTAG 1212 0.4546 MSLQHLQSSTLCQKSDGEGCFRGFAGVSFLPPPPPSFPHSFGVLGSSRESVCMSAEMGFQILSSSMEQQKKGWSFQTSEERSINGSDGGSEEYLGNQKNGMGMNQDGEEEEEGESFAGGKDHESGQSNKLCARGHWRPAEDAKLKELVSQYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEDRLLTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSVYRRRKPSTSQALDKRMEMTTHQNNACSESTITSIRDESASTCTDLSLNSSSSRVLPVLFTRFSPHQHHQPYEFQMGSSEEKMVSLRSGYLQKLDGSGNGFCHPGAMMMVMGVDQSVNSYSNSEISATESVANNRKNLYLDGEIDNGSEKINMPFIDFLGVGAT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00068 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 179 IPR017930 -
Eupl01g00068 403 Gene3D - 133 184 - -
Eupl01g00068 403 MobiDBLite consensus disorder prediction 71 103 - -
Eupl01g00068 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 180 234 IPR017930 -
Eupl01g00068 403 MobiDBLite consensus disorder prediction 71 128 - -
Eupl01g00068 403 PANTHER MYB PROTEIN-RELATED 124 263 - -
Eupl01g00068 403 FunFam MYB transcription factor 186 258 - -
Eupl01g00068 403 ProSiteProfiles Myb-like domain profile. 133 179 IPR001005 -
Eupl01g00068 403 SMART sant 132 181 IPR001005 -
Eupl01g00068 403 SMART sant 184 232 IPR001005 -
Eupl01g00068 403 CDD SANT 136 177 IPR001005 -
Eupl01g00068 403 CDD SANT 187 227 IPR001005 -
Eupl01g00068 403 Pfam Myb-like DNA-binding domain 136 196 - -
Eupl01g00068 403 SUPERFAMILY Homeodomain-like 133 226 IPR009057 -
Eupl01g00068 403 ProSiteProfiles Myb-like domain profile. 180 230 IPR001005 -
Eupl01g00068 403 FunFam MYB transcription factor 133 184 - -
Eupl01g00068 403 Gene3D - 186 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00068 Eupl-Chr1 2325010 2327375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00068 125 249 MYB Transcription Factor Family AT1G69560 84.127 8.43e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g00068 Myb_DNA-bind_6 7.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00068 K09422 - nnu:104588780 493.041