Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00043 ATGTTTTGGTCACAGAATCCCATAATCTTCCTAAGCTCACAACATAAGTCAGCCGTTACACAGAGAAAAGAAAAACCAAGAGAAGAAGGAACAACCATGAGGAGAGAAAGAGATGCAGAAGCTGAGTTAAATCTACCACCTGGGTTCCGGTTCCACCCCACTGACGAAGAGCTCGTCGTTCATTACCTATGTCGCAAAGTCAGTTACCAGTGTCTACCCGTTCCGATCATCGCCGAAGTTGATCTCTACAAATTCGATCCATGGCATCTTCCGGAGAAGGCTTTGTTTGGAAAAAAAGAGTGGTACTTCTTCACCCCTCGGGACCGGAAATACCCGAATGGATCGAGACCCAACAGAGCCGCTGGAAGTGGATACTGGAAAGCAACAGGCGCCGATAAACCAATCAAACCGACAGGAAGCGCGAGGCATGTTGGAATAAAGAAGGCGCTGGTCTTTTACTCTGGGAAAGCACCTAAAGGAGTCAAGACTAATTGGATCATGCATGAATATCGACTCGCAGAACCGAATCGGCACTCCAACAAAAAGGGTAGTCTGAGGCTGGATGACTGGGTTCTTTGCAGAATCTACAACAAGAAGAACAATTGGCAGACAATTCGAAACCAAAAGGAAGAACCATCCCTTGAAGAAACTATGGACTCCTCCTTTGAGGCGGTTGAAGACACTGCATCGGACAGTTTAACGACCCCAGAATCAGACGTTGAAAATGATCCACTTATAGAACTGGATAATCAGGCTTTGCCCCGTGGGAATCCATCTCAAGCTCTAGATGTCGTGCAAGCAACACAAACTGATACAAAATGCAGTTTTCAGATGGGGAACTGTCTGAAAGAGGAAGATAATAACGACTGGTTTATGGACTTGAATCTGGATGATTTGCAGAATTCCCTTGTGGCATTTGGAGCGACACCTACACCAGATCTGACTTACCAGGATTACTACTTCTCGGGCCTTTGTTCTCCACGTTTGAAGCCTTACCAGACCAACCTGCCATCCTTGTGGAACTCTTGA 1029 0.4626 MFWSQNPIIFLSSQHKSAVTQRKEKPREEGTTMRRERDAEAELNLPPGFRFHPTDEELVVHYLCRKVSYQCLPVPIIAEVDLYKFDPWHLPEKALFGKKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIKPTGSARHVGIKKALVFYSGKAPKGVKTNWIMHEYRLAEPNRHSNKKGSLRLDDWVLCRIYNKKNNWQTIRNQKEEPSLEETMDSSFEAVEDTASDSLTTPESDVENDPLIELDNQALPRGNPSQALDVVQATQTDTKCSFQMGNCLKEEDNNDWFMDLNLDDLQNSLVAFGATPTPDLTYQDYYFSGLCSPRLKPYQTNLPSLWNS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00043 342 Gene3D NAC domain 54 204 IPR036093 GO:0003677|GO:0006355
Eupl01g00043 342 MobiDBLite consensus disorder prediction 207 241 - -
Eupl01g00043 342 FunFam NAC transcription factor 54 202 - -
Eupl01g00043 342 PANTHER NAC TRANSCRIPTION FACTOR 56 45 236 - -
Eupl01g00043 342 Pfam No apical meristem (NAM) protein 46 172 IPR003441 GO:0003677|GO:0006355
Eupl01g00043 342 MobiDBLite consensus disorder prediction 14 39 - -
Eupl01g00043 342 SUPERFAMILY NAC domain 39 198 IPR036093 GO:0003677|GO:0006355
Eupl01g00043 342 ProSiteProfiles NAC domain profile. 45 198 IPR003441 GO:0003677|GO:0006355
Eupl01g00043 342 MobiDBLite consensus disorder prediction 223 239 - -
Eupl01g00043 342 MobiDBLite consensus disorder prediction 18 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00043 Eupl-Chr1 1417178 1419233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00043 40 228 NAC Transcription Factor Family AT5G08790 64.948 9.66e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl01g00043 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00043 - - nnu:104597724 487.648