Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl01g00030 | ATGGCGAAAAGTCGGTTGAAAACACTAACTGAGCTTAGACGTGTAAGAGTGGATAGTCAGACGCTAATGGTGCATCGTTGTGGGAAGTGGGTGAAGCTTTCTGGAACAGATCTTCTTCCAGGAGACGTTGTCTCAATTGGGCGCTCTTCTGGTCAGAATGGGGAAGATAAGTCAGTTCCAGCAGACATGCTTATATTAGCTGGAAGCGCAATTGTGAATGAAGCTATTCTTACAGGCGAGTCTACTCCTCAGTGGAAGGTTTCAATCACAGGAAGGGTATTTGAAGAGAAGTTATCGGCTAAGCGAGATAAAAGCCATATTCTGTTTGGTGGGACAAAAATATTGCAGCATGCTTCAGATAAGTCTTTTCCTCTGAAAACCCCTGATGGTGGATGCGTGGCTGTTGTGCTGCGAACTGGATTTGAGACAAGTCAAGGCAAACTGATGCGGACAATTTTATTTTCCACTGAGAGGGTTACTGCAAACAGCTGGGAAAGTGGGTTTTTTATTCTGTTCTTAGTTATATTTGCTGTCATTGCTGCTGGTTATGTGCTTAAAAAGGGGTTAGAAGATCCAACAAGGAGCAAATACAAGCTTTTCCTGAGTTGTTCATTGATTATTACTTCAGTGATCCCCCCTGAGCTGCCAATGGAGCTGTCAATAGCTGTTAATACATCTTTAATTGCATTAGCACGACGTGGGATATTCTGCACAGAGCCGTTCCGAATTCCCTTTGCTGGGAAGGTTGACATATGTTGTTTCGACAAAACAGGAACTCTTACATCAGATGACATGGAGTTCCAAGGAGTGGTTGGATCGAGTGACAGTGAGGATTTAGAGTCAGATATGACTAAAGTGCCTGTGCGCACTGTAGAAGTTCTTGCTGCTTGTCATGCATTGGTGTTTGTGGACAACAAGCTGGTCGGCGATCCCCTTGAAAAGGCAGCACTTAAAGGAATAGACTGGATTTATACGTCTGATGAGAAGGCCATGCCCAAAAAGGGAGGTGGTCTTGCTGTGCAGATTGTTCAGAGACACCACTTTGCATCTCACTTGAAACGTATGGCAGTTGTCGTTCGTGTTCATGAAGAATTTTTCGCTTTTGTGAAGGGTGCACCAGAAACTCTCCAGGAGAGGCTGATCGATTTGCCATCATCATATGTTGAGACTTACAAGAAATATACACGTCAAGGGTCTCGGGTTTTGGCCCTTGCATACAAGCCTCTTCCAGAAATGGCGGTTAGTGAAGCTAGAAGCTTGGATAGGGAATCAGTCGAGAGTGGCCTTACTTTTGCTGGTTTCGCGGTTTTCAACTGTCCTATTAGAGCAGACTCAGCTTCTGTTTTATCTGAATTAAAAGAATCGTCGCATGACTTGGTGATGATTACTGGCGATCAAGCTTTGACAGCCTGCCATGTTGCTAGCCAAGTTCATATTATTTCGAAGCCGACACTGATTCTAGGTCTGGCAAGGAATGGTGAAGGTTTGAAATGGATTTCGCCAGATGAAACCGAAATATATCCCTATTGCGAGAAAGAGGTGGAAGCTTTGTCAGACTCTCATGATCTCTGCATTGGAGGGGACTGCTTTGAAATGTTACTGCAGACTTCTGCTGTTCTCCAAGTCATCCCTTATGTGAAGGTTTTTGCAAGGGTTGCGCCTGAGCAGAAGGAACTCATCATGACTACCTTTAAAACAGTGGGGAGGATGACATTGATGTGTGGAGATGGAACCAATGATGTTGGGGCTCTGAAGCAGGCCCATGTAGGTGTTGCCCTTCTGAATGCAGTACCGCCGGCTCAAACTGGAGAATCATCCTCTCAAACATCCAAATCTGAAACAAAGTCGGGTAAGTCAAAGAAACCAAAGCCTGGATTGGAATCACCAAGTTCAGGAGGGACCCTTAGTCTAAATGGAGATGGTCCTTCAAGAGGCAGAGCTGTCACACGGTCAGATTCCGCTGGTCCCTCGGGGAGTAACCGCCATCTGACAGCTGCAGAGAAGCAGCGACAGAAGCTAAAGAAGATCATTGATGAGATGGATGAGGAGGGTGACGGTCGTGCTCCACCTATCGTCAAGCTGGGTGATGCGTCAATGGCATCTCCATTCACTGCAAAACATGCATCTGTTGCCCCCACAACAGACATAATCCGGCAGGGCCGGAGTACTCTGGTGACCACTCTCCAGATGTTCAAGATACTTGGCCTCAATTGCCTTGCGACGGCTTATGTGCTGAGTGTTATGTACCTGGATGGTGTCAAGCTCGGTGATATCCAGGCGACCATCAGTGGCATCTTCACGGCTGCCTTCTTCCTCTTTATCTCTCATGCCCGTCCCCTCCCAACCCTTTCAGCTTCCCGGCCACACCCGAACATCTTCTGTGCTTATGTCTTACTCTCTCTCCTTGGCCAGTTTGCAATCCACCTAATTTTCTTGATTTCTGCCGTCAACGAGGCTGCTAAGTACATGCCAGAGGAATGCATCGAGCCAGACTCAGAATTCCATCCAAACCTGGTGAACACTGTGTCATACATGGTGAGCATGATGATCCAGGTAGCCACCTTTGCTGTGAACTACATGGGCCACCCATTCAACCAAAGCATCCCAGAGAACAAGCCATTCTTGTATGCCTTGTTGGCTGCAGTTGGATTCTTTACAGTCATCACCTCAGATCTGTTTAGGGACTTGAATGACTGGCTGAAGCTGGTGCCACTGCCGGATACATTACAGGGGAAGCTACTACTTTGGGCTTTTCTCATGTTCTCAAGCTGTTACATGTGGGAGAGGTTGTTGAGGTGGGCTTTCCCTGGCCGGATTCCAGCATGGAAGAGACGGCAACGGAAGGCAGCAGCTACTCTACAGAAGAAGAATGTCTGA | 2877 | 0.4699 | MAKSRLKTLTELRRVRVDSQTLMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSITGRVFEEKLSAKRDKSHILFGGTKILQHASDKSFPLKTPDGGCVAVVLRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFQGVVGSSDSEDLESDMTKVPVRTVEVLAACHALVFVDNKLVGDPLEKAALKGIDWIYTSDEKAMPKKGGGLAVQIVQRHHFASHLKRMAVVVRVHEEFFAFVKGAPETLQERLIDLPSSYVETYKKYTRQGSRVLALAYKPLPEMAVSEARSLDRESVESGLTFAGFAVFNCPIRADSASVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTLILGLARNGEGLKWISPDETEIYPYCEKEVEALSDSHDLCIGGDCFEMLLQTSAVLQVIPYVKVFARVAPEQKELIMTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPAQTGESSSQTSKSETKSGKSKKPKPGLESPSSGGTLSLNGDGPSRGRAVTRSDSAGPSGSNRHLTAAEKQRQKLKKIIDEMDEEGDGRAPPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGIFTAAFFLFISHARPLPTLSASRPHPNIFCAYVLLSLLGQFAIHLIFLISAVNEAAKYMPEECIEPDSEFHPNLVNTVSYMVSMMIQVATFAVNYMGHPFNQSIPENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPDTLQGKLLLWAFLMFSSCYMWERLLRWAFPGRIPAWKRRQRKAAATLQKKNV* | 959 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl01g00030 | 958 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 259 | 443 | IPR023299 | GO:0000166 | |
| Eupl01g00030 | 958 | FunFam | Cation-transporting ATPase | 434 | 610 | - | - | |
| Eupl01g00030 | 958 | Pfam | E1-E2 ATPase | 20 | 233 | - | - | |
| Eupl01g00030 | 958 | Pfam | haloacid dehalogenase-like hydrolase | 250 | 478 | - | - | |
| Eupl01g00030 | 958 | FunFam | Cation-transporting ATPase | 1 | 153 | - | - | |
| Eupl01g00030 | 958 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 255 | 261 | IPR018303 | - | |
| Eupl01g00030 | 958 | NCBIfam | HAD-IC family P-type ATPase | 545 | 593 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl01g00030 | 958 | NCBIfam | HAD-IC family P-type ATPase | 168 | 280 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl01g00030 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 574 | 593 | - | - | |
| Eupl01g00030 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 455 | 465 | - | - | |
| Eupl01g00030 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 253 | 267 | - | - | |
| Eupl01g00030 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 73 | 87 | - | - | |
| Eupl01g00030 | 958 | Gene3D | - | 1 | 153 | - | - | |
| Eupl01g00030 | 958 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 2 | 935 | IPR006544 | GO:0006812|GO:0016020|GO:0019829|GO:0140358 | |
| Eupl01g00030 | 958 | MobiDBLite | consensus disorder prediction | 599 | 613 | - | - | |
| Eupl01g00030 | 958 | SFLD | p-type atpase | 234 | 722 | IPR044492 | - | |
| Eupl01g00030 | 958 | SUPERFAMILY | Calcium ATPase, transduction domain A | 20 | 152 | IPR008250 | - | |
| Eupl01g00030 | 958 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 167 | 936 | IPR023298 | - | |
| Eupl01g00030 | 958 | Gene3D | - | 248 | 433 | IPR023299 | GO:0000166 | |
| Eupl01g00030 | 958 | NCBIfam | P-type ATPase of unknown pump specificity (type V) | 2 | 916 | IPR006544 | GO:0006812|GO:0016020|GO:0019829|GO:0140358 | |
| Eupl01g00030 | 958 | MobiDBLite | consensus disorder prediction | 650 | 664 | - | - | |
| Eupl01g00030 | 958 | MobiDBLite | consensus disorder prediction | 598 | 671 | - | - | |
| Eupl01g00030 | 958 | FunFam | Cation-transporting ATPase | 249 | 433 | - | - | |
| Eupl01g00030 | 958 | Coils | Coil | 663 | 683 | - | - | |
| Eupl01g00030 | 958 | Gene3D | - | 434 | 609 | IPR023214 | - | |
| Eupl01g00030 | 958 | SUPERFAMILY | HAD-like | 248 | 601 | IPR036412 | - | |
| Eupl01g00030 | 958 | ProSitePatterns | Hypothetical cof family signature 2. | 574 | 596 | - | - | |
| Eupl01g00030 | 958 | SFLD | Haloacid Dehalogenase | 234 | 722 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl01g00030 | 1 | 957 | Primary Pumps ATPases | AT5G23630 | 76.330 | 0.0 | 1502 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl01g00030 | K14950 | - | msin:131231956 | 1662.89 |