LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g1398	AAAACGAGATCAATCATTAATTCTCAATCTCATGCTTTTCGACGAGCTAAAGAATTTCAAGCAACTCTACCCCCAGAATCTCAAAGCCTCATCATCATCAAGTTCATGCTCCCATCACATGTGACTAGAGGATTTTGGCTGGGTCTTCCTAAACATTTCTGTAAGTTGTATTTGCCAAAGCATGATGGAGAGATTACTTTGATAGATGAGAATAAAAAAGAATATAAAACAAATTATCTTACTAACAAGATGGGCTTAAGTGGTGGGTGGAGAAAATTTTCCATTGATCACAATTTACTTGAGGGTGATGTTTTAGTTTTCCAGTTACTCCAACCTACCAAATTCAAGATAATTAATAAATCAAATTTTTTTACAACACTTCATTGTTTGGGTTATGTAGTTAATCTTTTGCACCTATCACTTCTAAAGGTGTGCATTATAAGATCTCCTAAGCCAAAAGAATTTGATGCTGCTGTCAACCTTCTACATTTAGGTTATTCTGTGGAACATAATTCTGATCAACCTGAAAATATTGGTGAACAAGATGTAGATGATAGCTCTAAAGTCATCAATGAGATTAGATTATTATCAGAATCTGCGATAATTGGCATTGAGAATTTCAACATTCTAGTTAATGGTTTGGCTATTGACTCAGAACTCTCTGAACATGAGAAGATCAAGTACTATGAACTTTGTTGTAGTCAGGGAATGTTCCTTCACGAGAATCTTCTTGAAAGCCAAAACCCTAAACTGGTTGCTGGAATGATCACTGAGACCATTGCTATTGCTGATGCTATTAAATCCAGCACAATCACAACCCCTCCAGATAGTTTTGCATCATGGTATAAAAGTTTGAAAGGATTGGAAACACTAGGAATGAACATTAGTTTCTTACTCATTAGGATGGATCAGCTTATGAGTTTAGCTTCTAAATCAAAGAGGTACGTAGAGGCAAGGCTCAAGCGAGACCAAGCTGAAGAGGAAAAGCAATCTCTTGAAATAAAGCTTGAGGAAGTGAAAGACATCATAAAGAAACTTGATAATGAGATTGACTCCCAAGATCTGAACCTTGAGAAGTTGGAGACTGTGTTTGAAGAAGTAGCTAATTATCCTTGGTGA	1119	0.3601	KTRSIINSQSHAFRRAKEFQATLPPESQSLIIIKFMLPSHVTRGFWLGLPKHFCKLYLPKHDGEITLIDENKKEYKTNYLTNKMGLSGGWRKFSIDHNLLEGDVLVFQLLQPTKFKIINKSNFFTTLHCLGYVVNLLHLSLLKVCIIRSPKPKEFDAAVNLLHLGYSVEHNSDQPENIGEQDVDDSSKVINEIRLLSESAIIGIENFNILVNGLAIDSELSEHEKIKYYELCCSQGMFLHENLLESQNPKLVAGMITETIAIADAIKSSTITTPPDSFASWYKSLKGLETLGMNISFLLIRMDQLMSLASKSKRYVEARLKRDQAEEEKQSLEIKLEEVKDIIKKLDNEIDSQDLNLEKLETVFEEVANYPW	372

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Enph9g1398	372	SMART	B3_2	32	121	IPR003340	GO:0003677
Enph9g1398	372	ProSiteProfiles	B3 DNA-binding domain profile.	32	123	IPR003340	GO:0003677
Enph9g1398	372	PANTHER	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	10	149	IPR044837	-
Enph9g1398	372	Gene3D	-	6	122	IPR015300	-
Enph9g1398	372	Coils	Coil	308	363	-	-
Enph9g1398	372	CDD	B3_DNA	31	117	IPR003340	GO:0003677
Enph9g1398	372	SUPERFAMILY	DNA-binding pseudobarrel domain	27	117	IPR015300	-
Enph9g1398	372	Pfam	B3 DNA binding domain	33	116	IPR003340	GO:0003677

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g1398	Enph-Chr9	22682111	22683849	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g1398	7	117	B3 DNA Binding Superfamily	AT3G19184	50.450	7.06e-32	120

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Enph9g1398		B3	1.4e-14	CL0405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g1398	-		-	qsa:O6P43_011706	333.569

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