Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph9g1387 | ATGGCCTATGGACATTATCTATCCCCAGAATGGAAATCCAGCTCCAGTGATGCTGAAAACTCCACTAATGGTTGTTTCGATTGCAACATCTGCTTAGACATTGCTTGTGAACCGGTTGTCACACACTGTGGCCACCTTTACTGCTGGCCCTGCATTTACAAGTGGCTTCATTTCCAAACTGATTCCTTAATATCTGATGAGCACCCTCAATGCCCTGTTTGCAAGGCTTGTATATCCTCTTCCACGATCATCCCACTTTACGGTGGAGGGCAGGCTCCACTGGCTCAAAGTAAGCACCATGGTGAGAAGGCATCGGGTCAGGCCTTTTCTATTCCACCAAGACCCTCTGCAACCAGTGTTGAAGCTCCACTGACAACATCATCTCATCGTATCCCGCATCAGAATCAGCATTTTGTTGCTTCTCTAGATCAAGAGAATGCTTCATCATCGCAAATGGTTAATGTTGGCACTACCTTGATGCCAGCATCCCATCATCCTCTGCCTGGGATGTTCGGAGAGATGGTTTATGCTAGAGTATTTGGCAACCTGGAAAATTTATACACATATCGGAATTCATATCATCTGGTGGGAAGTAACAGCCCCAGATTGAGAAGGCAGCAGATGCAGGCTGACAAATCATTGAAAAGAATCTCAATTTTCCTGTGTGGCTGCATTCTTTTGTGTCTTCTAGTTTTTTGA | 699 | 0.4535 | MAYGHYLSPEWKSSSSDAENSTNGCFDCNICLDIACEPVVTHCGHLYCWPCIYKWLHFQTDSLISDEHPQCPVCKACISSSTIIPLYGGGQAPLAQSKHHGEKASGQAFSIPPRPSATSVEAPLTTSSHRIPHQNQHFVASLDQENASSSQMVNVGTTLMPASHHPLPGMFGEMVYARVFGNLENLYTYRNSYHLVGSNSPRLRRQQMQADKSLKRISIFLCGCILLCLLVF | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph9g1387 | 232 | Pfam | Zinc finger, C3HC4 type (RING finger) | 28 | 74 | IPR018957 | GO:0046872 | |
| Enph9g1387 | 232 | SUPERFAMILY | RING/U-box | 23 | 87 | - | - | |
| Enph9g1387 | 232 | MobiDBLite | consensus disorder prediction | 94 | 121 | - | - | |
| Enph9g1387 | 232 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 7 | 107 | IPR013083 | - | |
| Enph9g1387 | 232 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 11 | 229 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
| Enph9g1387 | 232 | ProSitePatterns | Zinc finger RING-type signature. | 43 | 52 | IPR017907 | - | |
| Enph9g1387 | 232 | ProSiteProfiles | Zinc finger RING-type profile. | 28 | 75 | IPR001841 | - | |
| Enph9g1387 | 232 | SMART | ring_2 | 28 | 74 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph9g1387 | Enph-Chr9 | 21955191 | 21955889 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph9g1387 | 9 | 218 | C3H Transcription Factor Family | AT4G27470 | 36.406 | 3.04e-44 | 147 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph9g1387 | K10666 | - | qsa:O6P43_031837 | 271.166 |