LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g1133	ATGAGCGAGGAAGGCAAGAGCAGGGGTGTCGTCATCGATCTCCCCAACCAGCCTTACTATGGCACGTTTCAAGGCGTTGCTAACTACTATCCGGCTGCTCCACCGCCAGCGCAGCAACCTCAGCCAGTTGTCGGATTTCCTCAGCCCATCCCGCCACCGGCAACGTATGGTGGTCCCCGGTATTATCACCAGGGATATCAAACCGTTCCAGGTTATGCTGTTGCTGAAGTAATGCCCATGAGAGAACATCATCTTCCTTGTTGTGGACTCGGTCTGGGTTGGTTTTTATTTATTATGGGGTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTGTGCTACTATGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAATTGCATGCACAGTTGCTTTCCATCAATACCAGGTCGTTGGTAGGGCTCTGCCCACGGAAGCAGATGACCACCCAAAGATTTACCGCATGAAACTCTGGGCCACGAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTAAGGAAACTGAAGAAGGTTAAGAAGAGCATTGGTCAAGTACTTGCTATCAATGAGATTTTTGAGAAGAATCCAACCAAGATCAACAACTATGGCGTATGGTTACGTTATCAGAGTAGAACTGGCTATCACAACATGTACAAAGAGTACCGTGATACCACTCTAAACGGTGCTGTGGAGCAGATGTACAATGAGATGGCTTCCCGTCATAGGGTCCGGTTCCCTTGCATTCAAATCATCAAGACTGCCACCATCCCAGCTAAGCTTTGCAAAAGGGAGAGCACCAAGCAATTCCATAACTCAAAAATAAAGTTCCCGTTGGTTTTCAAGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACCACATACAAGGCAAAAAAGCCCAACTTGTTTATGTGA	924	0.4729	MSEEGKSRGVVIDLPNQPYYGTFQGVANYYPAAPPPAQQPQPVVGFPQPIPPPATYGGPRYYHQGYQTVPGYAVAEVMPMREHHLPCCGLGLGWFLFIMGFFLGGIPWYVGAFVLLCVQMDYREKPGLIACTVAFHQYQVVGRALPTEADDHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSIGQVLAINEIFEKNPTKINNYGVWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKAKKPNLFM	307

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph9g1133	307	Hamap	50S ribosomal protein L18Ae [rpl18a].	135	198	IPR028877	-
	Enph9g1133	307	SUPERFAMILY	RplX-like	200	275	-	-
	Enph9g1133	307	Pfam	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A	136	257	IPR023573	GO:0003735\|GO:0005840\|GO:0006412
	Enph9g1133	307	FunFam	60S ribosomal protein L18a	201	276	-	-
	Enph9g1133	307	PANTHER	60S RIBOSOMAL PROTEIN L18A	132	306	IPR028877	-
	Enph9g1133	307	Gene3D	-	129	200	-	-
	Enph9g1133	307	FunFam	60S ribosomal protein L18a	131	200	-	-
	Enph9g1133	307	Gene3D	-	201	276	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g1133	Enph-Chr9	15969363	15979229	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g1133	135	307	Cytoplasmic Ribosomal Protein Gene Family	AT2G34480	91.329	8.53e-117	333

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g1133	K02882		-	cave:132168791	507.294

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