Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph9g1068 ATGGACCCTGGCAAACTCTTCATTGGTGGAATTTCATGGGACACAAATGAAGAACGACTCAGACAGTACTTTCAGAATTTTGGAGATGTGGTAGAAGCAGTTATTATGAAGGATCGGACAACAGGGCGTGCCCGTGGATTTGGATTTATTGTTTTTTCTGATCCTTCTGTTGCTGAACAAGTTGTTATGGAAAAGCATGTCATAGATGGTAGAACTGTTGAAGCAAAAAAGGCAGTCCCTAGAGATGATCAGAACATTTCAAACAGAAGCAACAGCAGCATTCATGGATCACCTGGTCCTGCCCGTACAAAGAAGATATTTGTTGGAGGTCTAGCATCCACAGTTACTGAGAGTGACTTCAAGATGTACTTTGATCAATTTGGAACAATTACAGATGTAGTTGTGATGTATGACCATAATACTCAAAGGCCGAGAGGTTTCGGATTCATCACCTATGATTCTGAGGAAGCAGTGGATAAAGTTCTGTATAAAACTTTTCATGAACTAAATGGTAAGATGGTTGAGGTTAAGCGAGCTGTTCCGAAGGAATTATCCCAAGGTCCTAGTAGAAGCCAATTAGCTGGATATAACTATAGTTTAAATAGAGTTAGTGGCTTTTCGAATGGTTTCGTTCAGGGATATAACCCTAGCTTGGTTGGAGGGCATGGACTTAGAGCAGATGGCAGATTTAGTCCGGTTAATGTTGGTCGAAATGGATATCCTCCTTTAAGTCCTAGTTATGGGACGGGATTCAATTTTGAGCCAGCATTGAGTCAAAATGGAAATTCAAACTTAACTTCTTCCCTTATTTTGGGACGAGCATTGAACCCTTCACACAATGGAAATTCAAGCAGGTACCATAACGTCATGGGGTATACTGGTACAAGTGTAGGAAACAATTCAACAAATCAGAATTTGTGGGGGAACGAAAATCTTAGTTTTGCTAATAACCCTACAAATTCTGATGGTTTTCTTGGGTATGGACGTCAAAATTCAAGCATGGGTTCTTTTGGTAATATTGGAACGCTGTGGAGGTCCTCCCCTACTGCAGATCAAGCTGGAACTATTGGCTCTGGCTATGGTAAGGGCAGTCACAGCTATGGTTTTGGAGATGTTAATTTTAGGCCTAAAGCAGTAGGATATGGAAAAGCTAATGAAGCCATTGCTGAGTCAGTGTCTTCATATGCTCTATCAAATGGCAATTATGATGGGGCATATAAAGAAGTCTACGAAGCTGGGTCCATTTTTGGTGACCACACTTGGAGATCATCACCTTCAGAACTTGAAGATACTGGTTCTCTTGGTTATGACCTTGGAAATGCTGTTTCAGACTTGATGAGCAAAAACTCCGGTGGCCACATCGGGGCTTATGCTGCTGCTAATAGACAACCAAATAGAGATGTTACAGTGAAGATGTCTGGTGCAGAAGGTGACTGGATATGGAAAGCATAA 1452 0.4139 MDPGKLFIGGISWDTNEERLRQYFQNFGDVVEAVIMKDRTTGRARGFGFIVFSDPSVAEQVVMEKHVIDGRTVEAKKAVPRDDQNISNRSNSSIHGSPGPARTKKIFVGGLASTVTESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLYKTFHELNGKMVEVKRAVPKELSQGPSRSQLAGYNYSLNRVSGFSNGFVQGYNPSLVGGHGLRADGRFSPVNVGRNGYPPLSPSYGTGFNFEPALSQNGNSNLTSSLILGRALNPSHNGNSSRYHNVMGYTGTSVGNNSTNQNLWGNENLSFANNPTNSDGFLGYGRQNSSMGSFGNIGTLWRSSPTADQAGTIGSGYGKGSHSYGFGDVNFRPKAVGYGKANEAIAESVSSYALSNGNYDGAYKEVYEAGSIFGDHTWRSSPSELEDTGSLGYDLGNAVSDLMSKNSGGHIGAYAAANRQPNRDVTVKMSGAEGDWIWKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph9g1068 483 CDD RRM2_Hrp1p 105 182 - -
Enph9g1068 483 Gene3D - 3 86 IPR012677 -
Enph9g1068 483 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 2 466 - -
Enph9g1068 483 FunFam Heterogeneous nuclear ribonucleoprotein 1 3 85 - -
Enph9g1068 483 MobiDBLite consensus disorder prediction 78 100 - -
Enph9g1068 483 SUPERFAMILY RNA-binding domain, RBD 3 97 IPR035979 GO:0003676
Enph9g1068 483 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 181 IPR000504 GO:0003723
Enph9g1068 483 FunFam Heterogeneous nuclear ribonucleoprotein 1 101 188 - -
Enph9g1068 483 SMART rrm1_1 5 76 IPR000504 GO:0003723
Enph9g1068 483 SMART rrm1_1 105 177 IPR000504 GO:0003723
Enph9g1068 483 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 72 IPR000504 GO:0003723
Enph9g1068 483 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 164 IPR000504 GO:0003723
Enph9g1068 483 CDD RRM1_hnRNPA_hnRNPD_like 6 76 - -
Enph9g1068 483 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 80 IPR000504 GO:0003723
Enph9g1068 483 SUPERFAMILY RNA-binding domain, RBD 100 200 IPR035979 GO:0003676
Enph9g1068 483 Gene3D - 101 191 IPR012677 -
Enph9g1068 483 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph9g1068 Enph-Chr9 15331759 15335832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph9g1068 4 218 Eukaryotic Initiation Factors Gene Family AT2G36660 20.536 1.71e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph9g1068 K14411 - cave:132171089 652.899