Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph9g0976 ATGGACGAGAACTATTTGTACAGCTGTTTTGCTCATACTGGCGAGGTGGCCTCGGTTAAAGTTATACGAAACAAGCAAACTAATCAATCTGAAGGTTATGGGTTTATTGAGTTTATCACACGTGCAGCTGCCGATAAAATTCTTCAAACATTTAATGGCACCATTATGCCAAATGGTGGGCAAACCTTCAGATTGAACTGGGCAACTTTTAGTGCTGGTGAGAGGCGGCATGATGATTCTCCCGATTATACAATATTTGTTGGAGATTTGGCTGTAGATGTTACAGATTACATGCTTCAGGAGACTTTTCGGTCTAGGTATTCTTCCGTTAAGGGTGCAAAAGTTGTGATTGATAGACTCACTGGGAGGACAAAGGGTTATGGTTTTGTTAGGTTTGGAGATGAAAGTGAACAAGTACGAGCTATGTCTGAGATGCAAGGTGTATTGTGTTCAACAAGAGCCATGCGGCTTGGACCAGCCACTAACAAAAACCCTGGCACTCAGCCAAAAGGGTGTCAAGAGGCTCTGTCATCTCGGAGCCTGGAACTGATTTCATCAGCTGAAATGGTTACCATTTTAGTGCATGGCCTTGTGAGCTATGCAGAAGAGGCGCTTAGGGTGTTAAATGGAACACTGTTGGGTGGGCAGAATGTTCGTCTCTCTTGGGGCCGTAGTCCATCGAACAAACAGACTCAGCCAGATCCAAACCAGTGGAATGGTGCTGCTGGGTATTACGGATATGCTCAGGGATATGAAAACTATGGATATGCTCCTGCTCCTTCACAGGACCCTAACATGTATGGAAGCTATCCTGGATATGCCAATTACCAACCACCACAGCAACAGCAGCAACTAGGATATAGTTGA 867 0.4487 MDENYLYSCFAHTGEVASVKVIRNKQTNQSEGYGFIEFITRAAADKILQTFNGTIMPNGGQTFRLNWATFSAGERRHDDSPDYTIFVGDLAVDVTDYMLQETFRSRYSSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQGVLCSTRAMRLGPATNKNPGTQPKGCQEALSSRSLELISSAEMVTILVHGLVSYAEEALRVLNGTLLGGQNVRLSWGRSPSNKQTQPDPNQWNGAAGYYGYAQGYENYGYAPAPSQDPNMYGSYPGYANYQPPQQQQQLGYS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph9g0976 288 Gene3D - 1 69 IPR012677 -
Enph9g0976 288 FunFam Polyadenylate-binding protein RBP45C 73 167 - -
Enph9g0976 288 SMART rrm1_1 1 66 IPR000504 GO:0003723
Enph9g0976 288 SMART rrm1_1 84 158 IPR000504 GO:0003723
Enph9g0976 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2 57 IPR000504 GO:0003723
Enph9g0976 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 148 IPR000504 GO:0003723
Enph9g0976 288 SUPERFAMILY RNA-binding domain, RBD 1 69 IPR035979 GO:0003676
Enph9g0976 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 162 IPR000504 GO:0003723
Enph9g0976 288 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 1 229 - -
Enph9g0976 288 MobiDBLite consensus disorder prediction 274 288 - -
Enph9g0976 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 70 IPR000504 GO:0003723
Enph9g0976 288 CDD RRM1_SECp43_like 1 71 - -
Enph9g0976 288 Gene3D - 70 170 IPR012677 -
Enph9g0976 288 MobiDBLite consensus disorder prediction 267 288 - -
Enph9g0976 288 SUPERFAMILY RNA-binding domain, RBD 80 228 IPR035979 GO:0003676
Enph9g0976 288 CDD RRM2_SECp43_like 82 161 - -
Enph9g0976 288 FunFam tRNA selenocysteine 1-associated protein 1 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph9g0976 Enph-Chr9 14480071 14483994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph9g0976 84 218 Eukaryotic Initiation Factors Gene Family AT4G34110 26.250 1.98e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph9g0976 - - aprc:113864230 419.468