LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph9g0954	ATGGACTCTCAAAATTTCTTATTTTCCCGAGAAAACCCTAGACCCCTCTCGTTCTCTACTGCTCCAATTGTCTCTTCAAAACCCATTATCCCCAATGAGATCGCGCAGAAGCCTTCCCCTTCCATTCTAGTGGGCCGATTCAAGGCTTTGCTAAAGGAACGCGAGGATGAATTCAGGGCTTCCTCTGATGATGATGTGCCAGTGCCACCCCCAAGCACTGAAGAAATCGTGCAAATTTACCAGTTGTTGTTGTCAGACCTCACTTGCAACTTAAAGCCTATTATTACGGATCTTACCATTATTGCTGAGCTTCAGATAGAGCATGCCAGAGGCATCGCCGATGCAATTTGCGCTCGGATTCTTGAGGTGCCTGCAGATCAAAAGTTGCCATCCCTCTATCTTTTGGACAGTATCGTGAAGAATGTTGGTCAGGAATACATCAGATGCTTCTCTTCATGTCTTCCTGAAATTTTCTGTGAGGCATACAAGCAGGTTCACCCTAAGCTGCATAATGCTATGCGCCATCTCTTTGGCACCTGGTCAACAGTCTTTCCACCTTCAGTCCTACGCAAGATTGAAGCTCAACTGCAGTTTTCTCAAGCAATTAATAGTCGATCATCCATCACTGATCCCCTTAGGGTGTCTGAATCTCGTCAAGCAACTCATGGCATACATATAAATCCAAAGTACTTGCAGCAGTTGGAACACTCTACTATGGATAATGCTGGAGGTGAAAAGTTAGATTCAACAGTAAATTTGGGTCTTACAAATTTTGGCCGTGGAGCTAGTAAGCTGCATCAACCTCTAACTAGCAGGCTTGGAAGATCTTCACCTTCAGCAATTGGACTTGATAGGCCTCCATCAGCAACTACAGATGAGTGTGCAGTTGACAATTCTACTGGCAGGATGGTTGAGAGAGAGACTCTTTCTCATCCTGCATTTGATTTTGGAGTTGGTAAAGCTGGAAGTAGAGGTGAAGAGTTGAGTGGGTGGAAACAGAAACAATATTCTGATGATGGTCGAAACCAATTTAAAGTTTCTATGTCGTATAGCCTTAGTAATGGTCATCAGCGTCAAAGTCTTAGAGCCTTAATTGATGCATATGGCAGTGATAAAAGCAATGAAGGTTTCAATAATAAGCCTTTATTGGTCGAGCGTTTGGACAAAAATGGTGTAAACAAGGCTGTGTCAACATCATGGCAAAACACTGAAGAGGAGGAATTTGATTGGGAAGATATGAGTCCAACATTAGTAGACCATAGTCGGAATAATGATTTCTTACCATCAAGTATTGGTTTCTCCAGGGAAGTGCCTGTTATTGGGGCAGCTACCTCAGAGCAGGATGCTGGGCGTAGTTGGTCTAGTCGGTCTCAGCTTCCATCAATGGATGATTCCTCTGTTATAGCAGGAGATAAATTTGTTTATTCCAATTATGGACGTGGATCACCAGTTCAGGCATCTGGATTTCGAGATCAGATGAACAAGAGTTTAAGCTCTCGCCCATCTCTCGATGCTTGGAATATTAGAGGTCGAGCAAGCAATCTTCAGATATCTCCTGTCAGTAATGTTCCAAATAGTGATATAAACCCATATGGATCTCGGTCTGTTTTGTCCAGAATGGGTTCTCCGCTTGATTCTAATGTGGAGACTCGTCCCCCGATTTTACCAGCATCTCTTCCGCTTGGAATAAGGCTCCCAGTTAATGTTCATGCTGTCCGTCCCCCCACCTTAAAGCCTACATTTCCATTGGACAAACATATCAGGAGTCAGCTTGAGCCAATACATGCTAGTAGCACCATTGTAAATCATAGTAAAAGTAATTCTTCGTTGTTTGATAGTGCTGAGAACAAGCTTACAGGTTTATCAAAGCGGCGTCATGTGCCAACTCAGCTAACCGGGCAGATTTCATTTAACCAGCAAAATTGTGGACAAGCACCACAACTACAAGTTTTTCCATCTCAGGATGTGCAAGAAAAGTTACATAGATCACAAGCACCAGCATCTTTGCAATTTAGTCATGGAAGCTCTTCGCAAGGACATACTGGTGGTATAAGTGCAGCTATGCCAAATTTGCGTCCTGTTTTACAATTCCCTATTCCTGTCCAAAACATTGCAAATAACTCTTCTCATTTGCAAAGGGGAGCCTTGATGTCTCTACCTCCAGTCTCCCATCCTGCTACATCATTAACAAGACCTCATTCAAATGTTGGTCCTATTGCATCAACCCAACAGCCAGGTGGTGCTTTTTCTGGTTTAATTAATTCACTTATGGCCCAAGGTTTGATCGCATTGACTAATCAACCTCCTGAACAGGATTCTGTTGGAACTGAGTTTAATCCAGATGTTCTAAAGATTCGTCATGAGTCTGTAATCAGTGCCTTGTATGGTGATCTTCCTAGACAATGCACTACTTGTGGCCTTCGATTCAAGTGCCAAGAAGAGCACAGTAGTCATATGGATTGGCATGTTACTAAGAACCGGATGTCTAAAAACCGTAAGCAGAAGCCCTCTCGCAAGTGGTTTGTGAGTGAGAGTATGTGGCTCAGTGGTGCAGAAGCATTAGGAACAGAACCAGTCCCTGGTTTTTTGCCAACTGAGATTATAGAGGAAAAGAAAGATGATGAAGAGTTGGGTGTGCCAGCTGATGAGGATCAGAATACATGTGCATTATGTGGTGAGCCTTTTGATGAGTTTTACAGTGATGAAACTGAGGAATGGATGTACAGAGGGGCTGTATATGTCAATGCACCCAGGGAAACAGTACCAGACATGGATAGGTTGCAGTTGGGCCCCATTGTTCATGCAAAATGCAGATCTGAGGCTAGTGTGGTCCCCTCTGAAGATTATGAACAGGATGAAAGGGACACCGAAGAGGAGGGTAGTCGGCGAAAACGAATGCGGAGTTAA	2907	0.4365	MDSQNFLFSRENPRPLSFSTAPIVSSKPIIPNEIAQKPSPSILVGRFKALLKEREDEFRASSDDDVPVPPPSTEEIVQIYQLLLSDLTCNLKPIITDLTIIAELQIEHARGIADAICARILEVPADQKLPSLYLLDSIVKNVGQEYIRCFSSCLPEIFCEAYKQVHPKLHNAMRHLFGTWSTVFPPSVLRKIEAQLQFSQAINSRSSITDPLRVSESRQATHGIHINPKYLQQLEHSTMDNAGGEKLDSTVNLGLTNFGRGASKLHQPLTSRLGRSSPSAIGLDRPPSATTDECAVDNSTGRMVERETLSHPAFDFGVGKAGSRGEELSGWKQKQYSDDGRNQFKVSMSYSLSNGHQRQSLRALIDAYGSDKSNEGFNNKPLLVERLDKNGVNKAVSTSWQNTEEEEFDWEDMSPTLVDHSRNNDFLPSSIGFSREVPVIGAATSEQDAGRSWSSRSQLPSMDDSSVIAGDKFVYSNYGRGSPVQASGFRDQMNKSLSSRPSLDAWNIRGRASNLQISPVSNVPNSDINPYGSRSVLSRMGSPLDSNVETRPPILPASLPLGIRLPVNVHAVRPPTLKPTFPLDKHIRSQLEPIHASSTIVNHSKSNSSLFDSAENKLTGLSKRRHVPTQLTGQISFNQQNCGQAPQLQVFPSQDVQEKLHRSQAPASLQFSHGSSSQGHTGGISAAMPNLRPVLQFPIPVQNIANNSSHLQRGALMSLPPVSHPATSLTRPHSNVGPIASTQQPGGAFSGLINSLMAQGLIALTNQPPEQDSVGTEFNPDVLKIRHESVISALYGDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSESMWLSGAEALGTEPVPGFLPTEIIEEKKDDEELGVPADEDQNTCALCGEPFDEFYSDETEEWMYRGAVYVNAPRETVPDMDRLQLGPIVHAKCRSEASVVPSEDYEQDERDTEEEGSRRKRMRS	968

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph9g0954	968	PANTHER	PRE-MRNA CLEAVAGE COMPLEX II	62	955	IPR045154	GO:0000993\|GO:0003729\|GO:0006369\|GO:0006378\|GO:0006379
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	447	463	-	-
	Enph9g0954	968	FunFam	polyadenylation and cleavage factor homolog 4	69	197	-	-
	Enph9g0954	968	SMART	558neu5	75	197	IPR006569	-
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	655	686	-	-
	Enph9g0954	968	ProSitePatterns	Zinc finger C2H2 type domain signature.	802	822	IPR013087	-
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	444	463	-	-
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	940	968	-	-
	Enph9g0954	968	ProSiteProfiles	CID domain profile.	72	200	IPR006569	-
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	655	684	-	-
	Enph9g0954	968	MobiDBLite	consensus disorder prediction	269	293	-	-
	Enph9g0954	968	SUPERFAMILY	ENTH/VHS domain	71	197	IPR008942	-
	Enph9g0954	968	Pfam	CID domain	92	191	IPR006569	-
	Enph9g0954	968	CDD	CID_Pcf11	80	197	IPR047415	-
	Enph9g0954	968	Gene3D	-	70	198	IPR008942	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph9g0954	Enph-Chr9	14326705	14334571	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph9g0954	740	968	C2H2 Transcription Factor Family	AT4G04885	73.799	5.40e-111	360

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph9g0954	K14400		-	gmx:100794796	1164.06